| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4872 |
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| Symbol | |
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| ID | 5318919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1376052 |
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| End bp | 1376939 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640776657 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001313589 |
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| Protein GI | 150376993 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR03339] aminoethylphosphonate catabolism associated LysR family transcriptional regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.511733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.704501 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGGAC CCCATCCCAT GCGCTATGTC CAGCTTCGCG CGTTCCATAA TGTTGCGGTC
TGTGGAGGCT TTTCCCGGGC GGCAGAGGCT TTGTTCCTCA CCCAGCCAGC CGTATCGGAC
CAGGTCCGAA AGCTGGAGGA GGAATATGAC GTCCTCCTCT TCAACCGGAA CAAGAAGCAG
GTGACGCTGA CCCAGGCTGG CCACCAGTTG CTGGAGATCA CCCGGCGCAT GTTCGACACC
GAACAGCAGG CGCTCGATCT GCTTTCGGAA TCGCGCGCGC TGCGCGCGGG AACACTTCGC
ATCGTCGCCG ACGCCGCCCA TCATCTGCTG CACATCCTTG CCGCCTTTCG CAAGAAATAT
CCGACGGTGC AGATCTCGCT GAGGGCCGGC AACACGGAAA CGGTCATCAC AAGTCTCTAT
TCCTACGAGG CGGACATCGG CGTTCTCGGC GAGATTCCCG AAAGCCGGGA ATTCGACATC
GTCAAACTGA ACTCCACGCC GATCATCGCA TTCGCGTCGA CGGAACATCC GATCGCCTGC
CGCAGCAATG TCAGTCTCGA GGAACTCGCG GGCCAGCCGC TGGTCATGCG CGAGCGGGGT
TCGAAGACGC GGCAGAAGCT CGAGGACTTT GCCGCCGCCG CCGGTGTCGC GCTGAAGCCG
GCCATCGAAG CGGAAGGTCG TGAGGCCGTG AGGGAGATCG TCGCGGCCGG GGCCGGTGTC
GGCTTTGTCT CCGCTGCCGA ATTCGGTCGG GACGGACGTC TCGCCCCGAT CGAAATTATA
GGAGCTGAGA TGCTGATGGA CGAGGCTCTG ATCTGCCTGA AGGAGCGCAG CGGCGGAAAG
CTCGTGCGCG CCTTCTTCGA GATCGCCCGC TCCCTGGCGG AGAAGTGA
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| Protein sequence | MIGPHPMRYV QLRAFHNVAV CGGFSRAAEA LFLTQPAVSD QVRKLEEEYD VLLFNRNKKQ
VTLTQAGHQL LEITRRMFDT EQQALDLLSE SRALRAGTLR IVADAAHHLL HILAAFRKKY
PTVQISLRAG NTETVITSLY SYEADIGVLG EIPESREFDI VKLNSTPIIA FASTEHPIAC
RSNVSLEELA GQPLVMRERG SKTRQKLEDF AAAAGVALKP AIEAEGREAV REIVAAGAGV
GFVSAAEFGR DGRLAPIEII GAEMLMDEAL ICLKERSGGK LVRAFFEIAR SLAEK
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