Gene Smed_4861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4861 
Symbol 
ID5318846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1362058 
End bp1362885 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content62% 
IMG OID640776646 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001313578 
Protein GI150376982 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0877464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAGG GCGTCGTCAA GAGCAAACCC GTTCGGCCGG GACGAATCTA CGGCGCACCG 
GGCGACGGGA TGAGCGGCCA TATCAGCCTG TTGACTGCGC TGGTGCTGAT CGCGTTTTGG
CTGCTCGTGA CGGAGATGGG CTGGATCAAA CCGCTGTTCC TGCCGTCGCC GCTCGCAGTC
TGGGACAAGT TCGTCATAGC ACTGACGGAA GGGGTCTCCA ACTCCACCTT GGCGCAGCAC
ACGCTGGCGA GCCTCGGCCG GGTGTTCGGA GCCTTTCTGC TTGCGCTCGT CACGGCAGTC
CCGGTGGGCA TTCTCATGGG CGTCAATCGG GTGGTGCGGG GGCTTTTCGA CCCCATCATC
GAATTCTACC GCCCGCTGCC GCCGCTCGCT TATCTGCCGC TGATCATCAT CTGGCTCGGC
ATCGGCGAAT TCCCGAAAGT TTTCCTGATC TATCTGGCGA TCTTTGCGCC GATGGCGATC
GCCGCCAGAG CCGGTGTGCG CTCGGTCTCG ACGGAACAGA TTCATGCCGC CTATGCCATG
GGCGCGACTC GGGCACAGGT GATCGGGCAT GTGATCATGA AGGCTGCGTT GCCGGAGATA
TTCACCGGTA TGCGCATCGG GATCGGCGTC GGCTGGACCA CGCTGGTCGC GGCCGAAATG
GTGGCCGCCC ATCGTGGACT CGGCTTCATG GTGCTGAATG CAGCCGAATA TCTCGCCAGC
GATACGGTCA TCATGGGGAT CGTCGTCATC GGCGTGTTCG CCTTCGCCTT CGACCTCATG
ATCCGCTACC TCGAAAAGAC GCTCATTCCC TGGAAGGGCA AAGTGTGA
 
Protein sequence
MLEGVVKSKP VRPGRIYGAP GDGMSGHISL LTALVLIAFW LLVTEMGWIK PLFLPSPLAV 
WDKFVIALTE GVSNSTLAQH TLASLGRVFG AFLLALVTAV PVGILMGVNR VVRGLFDPII
EFYRPLPPLA YLPLIIIWLG IGEFPKVFLI YLAIFAPMAI AARAGVRSVS TEQIHAAYAM
GATRAQVIGH VIMKAALPEI FTGMRIGIGV GWTTLVAAEM VAAHRGLGFM VLNAAEYLAS
DTVIMGIVVI GVFAFAFDLM IRYLEKTLIP WKGKV