Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4861 |
Symbol | |
ID | 5318846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 1362058 |
End bp | 1362885 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640776646 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001313578 |
Protein GI | 150376982 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0877464 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGAGG GCGTCGTCAA GAGCAAACCC GTTCGGCCGG GACGAATCTA CGGCGCACCG GGCGACGGGA TGAGCGGCCA TATCAGCCTG TTGACTGCGC TGGTGCTGAT CGCGTTTTGG CTGCTCGTGA CGGAGATGGG CTGGATCAAA CCGCTGTTCC TGCCGTCGCC GCTCGCAGTC TGGGACAAGT TCGTCATAGC ACTGACGGAA GGGGTCTCCA ACTCCACCTT GGCGCAGCAC ACGCTGGCGA GCCTCGGCCG GGTGTTCGGA GCCTTTCTGC TTGCGCTCGT CACGGCAGTC CCGGTGGGCA TTCTCATGGG CGTCAATCGG GTGGTGCGGG GGCTTTTCGA CCCCATCATC GAATTCTACC GCCCGCTGCC GCCGCTCGCT TATCTGCCGC TGATCATCAT CTGGCTCGGC ATCGGCGAAT TCCCGAAAGT TTTCCTGATC TATCTGGCGA TCTTTGCGCC GATGGCGATC GCCGCCAGAG CCGGTGTGCG CTCGGTCTCG ACGGAACAGA TTCATGCCGC CTATGCCATG GGCGCGACTC GGGCACAGGT GATCGGGCAT GTGATCATGA AGGCTGCGTT GCCGGAGATA TTCACCGGTA TGCGCATCGG GATCGGCGTC GGCTGGACCA CGCTGGTCGC GGCCGAAATG GTGGCCGCCC ATCGTGGACT CGGCTTCATG GTGCTGAATG CAGCCGAATA TCTCGCCAGC GATACGGTCA TCATGGGGAT CGTCGTCATC GGCGTGTTCG CCTTCGCCTT CGACCTCATG ATCCGCTACC TCGAAAAGAC GCTCATTCCC TGGAAGGGCA AAGTGTGA
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Protein sequence | MLEGVVKSKP VRPGRIYGAP GDGMSGHISL LTALVLIAFW LLVTEMGWIK PLFLPSPLAV WDKFVIALTE GVSNSTLAQH TLASLGRVFG AFLLALVTAV PVGILMGVNR VVRGLFDPII EFYRPLPPLA YLPLIIIWLG IGEFPKVFLI YLAIFAPMAI AARAGVRSVS TEQIHAAYAM GATRAQVIGH VIMKAALPEI FTGMRIGIGV GWTTLVAAEM VAAHRGLGFM VLNAAEYLAS DTVIMGIVVI GVFAFAFDLM IRYLEKTLIP WKGKV
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