Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4804 |
Symbol | |
ID | 5318691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 1324015 |
End bp | 1324515 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640776598 |
Product | hexapaptide repeat-containing transferase |
Protein accession | YP_001313530 |
Protein GI | 150376934 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.159641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGCCA ACGACGTCAC GCTGCATGAC GGTGTCGTGG TTCATCATCC GGATCTCGTC AATCTTTATG GTTGTACGAT CGGCTCGGGC ACGCGCATTG GCACGTTCGT GGAGATCCAG AAGAACACCA CAATTGGCCG GAATTGCAAG ATTTCCAGCC ACTCGTTCCT CTGCGAGGGT GTGACGCTCG AAGACGGCGT CTTCATCGGG CACGGCGTCA TGTTCACGAA CGATCTCTAT CCGCGGGCAA TCAACGCCGA CGGAGGACGT CAGTCGGAGG GCGACTGGAC GGTTGTTCCG ACGCGGGTCA AACAACGGGT CTCCATCGGC AGCAATGCGA CCATTCTCGC AGGTATCACG ATTGGCGAAA GCGCCCAGGT CGGTGCTGGC GCCGTGGTGA CCAGGGACGT GCCCGCTTAC ACGATCGTCG CCGGCGTACC CGCCAGGATG ATCGGACACA CCAAGGATGC GGCGGTCAAT ACGGTTCGGG CGGGGGCATG A
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Protein sequence | MIANDVTLHD GVVVHHPDLV NLYGCTIGSG TRIGTFVEIQ KNTTIGRNCK ISSHSFLCEG VTLEDGVFIG HGVMFTNDLY PRAINADGGR QSEGDWTVVP TRVKQRVSIG SNATILAGIT IGESAQVGAG AVVTRDVPAY TIVAGVPARM IGHTKDAAVN TVRAGA
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