Gene Smed_4804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4804 
Symbol 
ID5318691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1324015 
End bp1324515 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content60% 
IMG OID640776598 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_001313530 
Protein GI150376934 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.159641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCCA ACGACGTCAC GCTGCATGAC GGTGTCGTGG TTCATCATCC GGATCTCGTC 
AATCTTTATG GTTGTACGAT CGGCTCGGGC ACGCGCATTG GCACGTTCGT GGAGATCCAG
AAGAACACCA CAATTGGCCG GAATTGCAAG ATTTCCAGCC ACTCGTTCCT CTGCGAGGGT
GTGACGCTCG AAGACGGCGT CTTCATCGGG CACGGCGTCA TGTTCACGAA CGATCTCTAT
CCGCGGGCAA TCAACGCCGA CGGAGGACGT CAGTCGGAGG GCGACTGGAC GGTTGTTCCG
ACGCGGGTCA AACAACGGGT CTCCATCGGC AGCAATGCGA CCATTCTCGC AGGTATCACG
ATTGGCGAAA GCGCCCAGGT CGGTGCTGGC GCCGTGGTGA CCAGGGACGT GCCCGCTTAC
ACGATCGTCG CCGGCGTACC CGCCAGGATG ATCGGACACA CCAAGGATGC GGCGGTCAAT
ACGGTTCGGG CGGGGGCATG A
 
Protein sequence
MIANDVTLHD GVVVHHPDLV NLYGCTIGSG TRIGTFVEIQ KNTTIGRNCK ISSHSFLCEG 
VTLEDGVFIG HGVMFTNDLY PRAINADGGR QSEGDWTVVP TRVKQRVSIG SNATILAGIT
IGESAQVGAG AVVTRDVPAY TIVAGVPARM IGHTKDAAVN TVRAGA