Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4758 |
Symbol | |
ID | 5318482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 1278946 |
End bp | 1279536 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640776556 |
Product | hypothetical protein |
Protein accession | YP_001313488 |
Protein GI | 150376892 |
COG category | [S] Function unknown |
COG ID | [COG3336] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.343516 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0425976 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGGAC CGCTGGCGGC GCATATGGCC GTGCACATCC TGCTGATGAA CATAGTGGCA CCGCTCGCAG CACTCGGACT GTCGCGGGTT CTGCAGAATA GCCGAGCAAT TTCCGGGCGC TTGCTGGGAC TTGCGACATT GGTGCAGATC GCCGGCCTAT GGGCCTGGCA CGCACCGCCT TTCCTCAACC GGGCACTGGA ATCGTCTTCG GTACATTTGC TGATGAATGG CAGCCTGTTT CTGAGCGCGT TCCTGTTCTG GTGGGCAGTC CTCCATTTCC GTGGCGAGCA CTCCTGGCAG CCGGTTGCCG CACTCCTGGT GACCAGTAAG CTCTATTGCC TGCTCGCCGT ACTCTTCGTC TTTGCGCCGC GCACGCTTTA TCCCGACTTC GCGAGTTCCC ATTTGGGGCA TGTCGTCGGC GGTCCGAGCA CCGATTTGAC CGATCAACAA CTGGCGGGGC TGATCATGTT GGCCGCCTGC CCGGTCACCT ATGTCCTGGC CGGAGTCGTG ATCGCGGCAC GCTGGCTCCT TGCAATGGAG AAAGAAGGGG ATGATCCCGG GTCCAGATCA GGTGCAGAAG CGTGGACCTG A
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Protein sequence | MTGPLAAHMA VHILLMNIVA PLAALGLSRV LQNSRAISGR LLGLATLVQI AGLWAWHAPP FLNRALESSS VHLLMNGSLF LSAFLFWWAV LHFRGEHSWQ PVAALLVTSK LYCLLAVLFV FAPRTLYPDF ASSHLGHVVG GPSTDLTDQQ LAGLIMLAAC PVTYVLAGVV IAARWLLAME KEGDDPGSRS GAEAWT
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