Gene Smed_4758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4758 
Symbol 
ID5318482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1278946 
End bp1279536 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content61% 
IMG OID640776556 
Producthypothetical protein 
Protein accessionYP_001313488 
Protein GI150376892 
COG category[S] Function unknown 
COG ID[COG3336] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.343516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0425976 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGAC CGCTGGCGGC GCATATGGCC GTGCACATCC TGCTGATGAA CATAGTGGCA 
CCGCTCGCAG CACTCGGACT GTCGCGGGTT CTGCAGAATA GCCGAGCAAT TTCCGGGCGC
TTGCTGGGAC TTGCGACATT GGTGCAGATC GCCGGCCTAT GGGCCTGGCA CGCACCGCCT
TTCCTCAACC GGGCACTGGA ATCGTCTTCG GTACATTTGC TGATGAATGG CAGCCTGTTT
CTGAGCGCGT TCCTGTTCTG GTGGGCAGTC CTCCATTTCC GTGGCGAGCA CTCCTGGCAG
CCGGTTGCCG CACTCCTGGT GACCAGTAAG CTCTATTGCC TGCTCGCCGT ACTCTTCGTC
TTTGCGCCGC GCACGCTTTA TCCCGACTTC GCGAGTTCCC ATTTGGGGCA TGTCGTCGGC
GGTCCGAGCA CCGATTTGAC CGATCAACAA CTGGCGGGGC TGATCATGTT GGCCGCCTGC
CCGGTCACCT ATGTCCTGGC CGGAGTCGTG ATCGCGGCAC GCTGGCTCCT TGCAATGGAG
AAAGAAGGGG ATGATCCCGG GTCCAGATCA GGTGCAGAAG CGTGGACCTG A
 
Protein sequence
MTGPLAAHMA VHILLMNIVA PLAALGLSRV LQNSRAISGR LLGLATLVQI AGLWAWHAPP 
FLNRALESSS VHLLMNGSLF LSAFLFWWAV LHFRGEHSWQ PVAALLVTSK LYCLLAVLFV
FAPRTLYPDF ASSHLGHVVG GPSTDLTDQQ LAGLIMLAAC PVTYVLAGVV IAARWLLAME
KEGDDPGSRS GAEAWT