| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4741 |
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| Symbol | |
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| ID | 5319109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1263518 |
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| End bp | 1264570 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776539 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001313471 |
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| Protein GI | 150376875 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00115423 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACCGACG TGGCGCGTAT CGCCGGCGTC TCACAGTCGA GTGTTTCCCT CGTGCTCAAC
GAGATGTCCG GAGCCCGCAT CTCGGCCGAG ACCCGGGCGC GCGTGCGCGA CGCGGCGCGC
AAGATCGGAT ACAGGTTGCC CAACACACGC CAGGACCTCG ACCACGCTCC CGCGATCGAA
AAAGACACGA TAGCCTTCAT CGTCGACGAG ATATCGACAA GTCCGCATCC GGTGGTCAGC
CTCGACGGCA TTCGCGACTA TGCCTTCGAG CAGGGCCTGC TCGTCTCTGC CCACGCCACT
CGCTCAAATC CGGACCTGGA GAGCGCCGTC CTACGGTCCG TCCTTCGAGA TCCGGCAATC
GCCGGCGTTA TTTATGCGAC GATCTTCACA CGGAAGGTGA GCGTGCCGCG CGAATTGGAA
AACGTCCCGA CGATCCTGTT GAACTGCTAT GCCGAGCCGC GCCAGCACAT GGCGATCGTA
CCGGGGGAGG TTGCGGGGGG CTTCGCGGCG ACCGCGCATC TAACGTCTCT CGGGCACCGG
CGCATCGGCT TCATCAACGG CGAACCCTGG ATGGACGCCG CTATCGACCG GCTCAAAGGC
TACAAGCAAG CCTTGGCGAC CGCCGATATC GCTTATGACG AGTCACTCGT GCGCAACGGC
GACTGGCTGC CATTGCGAGG CTACGAGGCC GCCCTGGAGC TGCTTGCGAT CGACAATCCG
CCGACCGCAA TCTTCTGCGG CAATGATCTG ATGGCGATCG GCGCGCTCGA GGCAGCGTCG
GAGCGGGGCT TGCGCGTGCC ACAGGACCTG TCGGTACTCG GCTACGACGA TCAAGAGCTC
GCTCGCTACA CGCATCCGCC ACTGTCGACG CTGGTGTTGC CGAACTACGA AATGGGCCAA
AAGGCCGCGG AAATCCTGAT CGACATGGCC ATACATGGAA AGAACCCGCG CCCGATGACG
ATCAAGGTGG ATGGGCCTCT CGTGAAACGA GGCACGACGG CCGCCGTCCC CGAGAGGATG
GCTGGACGTC CCTTTGCCTT GCGCGAGGGG TGA
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| Protein sequence | MTDVARIAGV SQSSVSLVLN EMSGARISAE TRARVRDAAR KIGYRLPNTR QDLDHAPAIE
KDTIAFIVDE ISTSPHPVVS LDGIRDYAFE QGLLVSAHAT RSNPDLESAV LRSVLRDPAI
AGVIYATIFT RKVSVPRELE NVPTILLNCY AEPRQHMAIV PGEVAGGFAA TAHLTSLGHR
RIGFINGEPW MDAAIDRLKG YKQALATADI AYDESLVRNG DWLPLRGYEA ALELLAIDNP
PTAIFCGNDL MAIGALEAAS ERGLRVPQDL SVLGYDDQEL ARYTHPPLST LVLPNYEMGQ
KAAEILIDMA IHGKNPRPMT IKVDGPLVKR GTTAAVPERM AGRPFALREG
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