| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4710 |
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| Symbol | |
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| ID | 5318860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1227899 |
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| End bp | 1230148 |
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| Gene Length | 2250 bp |
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| Protein Length | 749 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776508 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001313440 |
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| Protein GI | 150376844 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1216] Predicted glycosyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.436323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.224848 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGTTCG ACGACCGCAT GGGGGCCGCC AGCGGCATTT TCGAGGACGC GAAGGTTTTT
CGGCTCGGTT CCGAAGTGGC CGTATTGATC TCGGACCTCA AGAAAAAACT GCCGGCCGCA
GCAAAACACA GGCTCGTCAT GCCGGAGCAA CCCGTGCCGC TGGTCAGCAC CATCCTTCCT
CTGGCGGAAG GCGGTCAGCG GGTCCTTTGG GCCATGCGCC CAGGGGGCGA ACCGCGCCGC
GGACAGATTT CCGTCGATAG CGACTTCGTC CGAACGGTTG TCCTGCAGCC CGTCGGCGAA
CTTCCGCCCC TCGACGTGGA AGCCCTGTTT GCCGCGCTAA CACCGGAGGG CTGCGTCAAG
TTTGTGAACA CTCTGCTTAC TGTTTGGCGG AGCGCCTTCC GCCTGTCCCG GGATGCATTC
TTCATAGGCC TCGTCGAGGA CGCCCTTCAT GCGCTGACAT CGAGGCCGCG GCCTGCAAAG
ATCGCTTGCC CGATCATGCC GGGCCGGTAT CTGATCGAGA CCGCGATAAC TCCCGACTTC
GGTGAGATCA GCGCGGTCTA TTCGCTCGGT GCCAATGCCG TTTTGCCGCT GGAGTCGCAA
GCTGTGACCG GCCCAGATCG CGAGCACGAC CTGCGCCCCT GCCACTTCAT TGTCGAGTCT
CCTCGACACC CTCAATCCTA TGTTCTCGTC GGAAAACGAG GCGTGGCTGT TCGCGAACTC
TCCTCCGGAA AACCACATTA CACCAGTCTC CAGGCATGGT GGGCCGAACG GGGTGGCGCG
CCGGAGCTGC GCGAATTCGT CGTCCGATGG CTTTCGACGA CACCGGAGGG CGGACATTCG
ACCGCCGTCG ACCTCCAGCT TCGGACACCG CTTCCGGCAA GGCGGATCGA CAGATCATCG
ATGCATCCTT CCGCAGAAGT GGATCTCGCA TTGAGCCTTT CGGGCGGTCT GCTCGCCGGG
GGCTGGTCCC ATGATCCAAC AGCCACGCTC GCCGGCATCG ACTACCTGAA TGAGAACGGC
ACGGCGGTGC CCCTCGACGG CAATTGGTAC GAGTTTCCTG CCTGGGCACG CGGAACGGAC
GACAATACGC GCGCCGACGT AACCGGCTTC GTCGCCTGGC TGCCGTTAAA CGAGGCGCCG
GGCGCCTTGC TCCAGCCGCG CTTCCAGATG CGGCTCGCTT CCGGCGTCGT AAAACCGCTC
GTGCCGAAGC CACAACCCTT CGAAGCTTCG GCGCAGCGCA ACCGCATCCT GCGCGCGGTG
CCGCCCCAGC ACGCAGTCGA CCTGGCCTTC CGGACGATCC TTGCCCCCGC GCTGCAGGAC
GTAGAACATC GATTGGGCAG AACTGCCACG GTCGACTATA CCAAGGATTA CGACCTGCCG
CAGACGGCGC CCCTGGTTTC GATCGTCGTG CCGCTTTACC GTGTTCTCGA TTTTCTGCGG
TTCCAGCTCT CCGGCATGGC GACCGACCGC TGGCTCGCAA AGAATGTCGA GATCATCTAC
GTTCTGGATT CACCCGAGAT CCAGGACGAG ACGGAGCATC TTCTTGGCGG GCTGCATCTC
CTCCACGGGC TGCCGATGAA GCTCGTGGTG ATGAGCCGCA ACGGGGGCTA TGCCCGGGCC
TGCAATGCCG GCGCGCGCTT CGCCCGCGGC GCGGTCATCG TCATGCTGAA CTCCGACGTC
GTTCCGTCAG CAGCCGGCTG GCTGCAGAGG CTCATCCGGC CGCTCATGGA ACAGAAGAGC
CTCGGCGCCA TCGGCCCGAA GCTGATCTTC GAGGACGGAT CGCTCCAGCA CGCGGGACTC
TATTTCGCTC GCGATCAGCG CGGCATATGG CTCAACCACC ATTTCCACAA GGGCATGCCA
GGCGACTATG CGCCCGCTCA ATTTTCCAGG AGCGTCCCGG GGATCACAGG TGCGTGCCTC
GTCACGCGTC GGGAGACCTA CGAGCGCGTG GATGGATATA CGGAGGATTA CGTAATCGGC
GACTACGAGG ATAGCGACTT GTGCCTGAAG ATCCGCCGGT GCGGCTATGA CATCGTCTAC
GAGCCGTCTG CGTGTCTTTA TCATTTCGAA CGCCGCTCGA TCCGCCGCAG CGAGGACTAC
ATGCGCGGCG TCGCCAGCCA GTATAACTCC TGGCTGCACA CGGAGCGGTG GGATGACGAT
ATCGAGGCGC TGATGGCAGC ATATCTCGGC AGCGGCATCC AAGGGCTCGT CCGCCAAGAG
GCCGGTGCCA CAGCGAGGAG CGCCGCATGA
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| Protein sequence | MTFDDRMGAA SGIFEDAKVF RLGSEVAVLI SDLKKKLPAA AKHRLVMPEQ PVPLVSTILP
LAEGGQRVLW AMRPGGEPRR GQISVDSDFV RTVVLQPVGE LPPLDVEALF AALTPEGCVK
FVNTLLTVWR SAFRLSRDAF FIGLVEDALH ALTSRPRPAK IACPIMPGRY LIETAITPDF
GEISAVYSLG ANAVLPLESQ AVTGPDREHD LRPCHFIVES PRHPQSYVLV GKRGVAVREL
SSGKPHYTSL QAWWAERGGA PELREFVVRW LSTTPEGGHS TAVDLQLRTP LPARRIDRSS
MHPSAEVDLA LSLSGGLLAG GWSHDPTATL AGIDYLNENG TAVPLDGNWY EFPAWARGTD
DNTRADVTGF VAWLPLNEAP GALLQPRFQM RLASGVVKPL VPKPQPFEAS AQRNRILRAV
PPQHAVDLAF RTILAPALQD VEHRLGRTAT VDYTKDYDLP QTAPLVSIVV PLYRVLDFLR
FQLSGMATDR WLAKNVEIIY VLDSPEIQDE TEHLLGGLHL LHGLPMKLVV MSRNGGYARA
CNAGARFARG AVIVMLNSDV VPSAAGWLQR LIRPLMEQKS LGAIGPKLIF EDGSLQHAGL
YFARDQRGIW LNHHFHKGMP GDYAPAQFSR SVPGITGACL VTRRETYERV DGYTEDYVIG
DYEDSDLCLK IRRCGYDIVY EPSACLYHFE RRSIRRSEDY MRGVASQYNS WLHTERWDDD
IEALMAAYLG SGIQGLVRQE AGATARSAA
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