| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4679 |
|---|
| Symbol | |
|---|
| ID | 5318136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | + |
|---|
| Start bp | 1193844 |
|---|
| End bp | 1194977 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640776477 |
|---|
| Product | acyltransferase 3 |
|---|
| Protein accession | YP_001313409 |
|---|
| Protein GI | 150376813 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1835] Predicted acyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.876783 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.177775 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGTAG TGCGCGACCA GCAGCTTGAT GGCCTGAGAG CCGTCGCGGT CACAATGGTG
CTCTACGCGC ATTTCTTTGC AGCCGATGGA TCGCATTGGG GCCATCTTGG CGTCAGGCTG
TTCTTCGTGC TGAGTGGCTT TCTGATAACG CGGCTGCTGC TCGACGCCCG CGACGCTGCC
CGTTTCGAGC CGAGCACGGC GCTGAAGTCC TTCTATGCGC GCCGGGCGCT TCGTATTTTC
CCGCCTTATT TTGCCGTGCT GGCTGCGGTG TTTCTCCTGG ACTTGGAGCG CTCCAAGCAG
GTTATGGCAT GGCACGGGCT TTACCTGTCC AACTTCTGGT ATGCGCTGCA GAACGAATGG
TCGCCGTGGG TTCTCTGTCA TACGTGGAGC CTGAGCATCG AGGAGCAATT CTACCTCATC
TGGCCATTGG TCGTGCTGCT CCTGCCGCGC CGCTCGATTG CCGGGGTCTG CATCGGCGTC
ATCGTCTGCT CGCTCGTCTA CCGCTTCTAC TGGCCCTTCA CCGGTACGCC TTCGCTCGCG
CGCGATCTCC TGCCGCCGGC ATCCATGGAT GCGCTGGCCG TGGGCGCCTT GTTGGCTGCG
CGTCCATCCT GGCGTGCGGC TTGGCCGCGA TGGGCGGAAT TGAGCTGGAT TCCCCTTTCC
ATCGCTTCCT TCGCCCTGGT CTGGCTGAAG CCGGTTCCGA TGACCCCGGT CATAGCGTGG
CTCGCATGGA TCGGACTGGA GGTGGTCCCG CTCTTGCCAC TCGCCATGCT GGTCGGCAGC
TGTTCGAAGG GGATCGGCGG GATTGCCGGG CGGGTTGTCG CGCTTTCGCC CGTGGCGGCT
CTGGGCCGGA TCAGCTATGG CGTCTACCTC TTTCACGCCG TCGTACTGGC TGTGGTCGTC
CAGGCGCAGC CGTTCATCCC GGTCAATGTC ACGGATCAGG GGGTAGGGCG GTTCGTGGTC
GCCGGCGCTC TGACACTGAT GCTCGCCTCG GCGTCCTGGA TCCTCTTCGA AAAGCCGCTG
AACGGGCTGA AGCGCCACTT TCCCTATGTT CGTCCGGAGG GAGCGGCGGG GCCCGTAACT
GCCGTTCCTC GCGTCCGTCC CGACGAGGCC TTGCAAACAC CGCCCCTTCG ATAG
|
|---|
| Protein sequence | MQVVRDQQLD GLRAVAVTMV LYAHFFAADG SHWGHLGVRL FFVLSGFLIT RLLLDARDAA
RFEPSTALKS FYARRALRIF PPYFAVLAAV FLLDLERSKQ VMAWHGLYLS NFWYALQNEW
SPWVLCHTWS LSIEEQFYLI WPLVVLLLPR RSIAGVCIGV IVCSLVYRFY WPFTGTPSLA
RDLLPPASMD ALAVGALLAA RPSWRAAWPR WAELSWIPLS IASFALVWLK PVPMTPVIAW
LAWIGLEVVP LLPLAMLVGS CSKGIGGIAG RVVALSPVAA LGRISYGVYL FHAVVLAVVV
QAQPFIPVNV TDQGVGRFVV AGALTLMLAS ASWILFEKPL NGLKRHFPYV RPEGAAGPVT
AVPRVRPDEA LQTPPLR
|
|---|
| |