Gene Smed_4601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4601 
Symbol 
ID5318511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1103111 
End bp1103575 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content58% 
IMG OID640776402 
Productcyclic nucleotide-binding protein 
Protein accessionYP_001313334 
Protein GI150376738 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.930738 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCTAA AAGATGAAGT GGAAATGCTG CGCCGGATAA CGCTGTTTTC CGGACTACCG 
CCTGCGAAGC TCAAGCTTCT GGCATTCACC TCCGACCGGG TGATGTACAG CGCGGGAGAA
GATCTGTTCA ACCAGGGGGA TATCGGCGAC GCGGCTTATG TGATCCTGTC GGGCAATGCG
GATGTGCTCG TGTCGACGCC GAACGGACAG CTGAAAGTCG CCGAAGTGGA GCAGAATTCG
ATCGTCGGCG AAATCGCCAT TCTGTGCAAC ACGCCGCGCA CGGCAACTGT CAAAACGACC
ACCGCGCTCG AAGCGCTGCG CATCCGGAAA GACGATTTTT TGAAGCTGCT GGCTGATTTC
CCGGAAATGG CAGTCGAGAT CATGCGGGTT CTGGCCGACC GACTGAGCCA GACGACATCC
GAATTGACGG AAGCCCGCAG TCGCGTGCAA AGGGCCGAGG CCTGA
 
Protein sequence
MLLKDEVEML RRITLFSGLP PAKLKLLAFT SDRVMYSAGE DLFNQGDIGD AAYVILSGNA 
DVLVSTPNGQ LKVAEVEQNS IVGEIAILCN TPRTATVKTT TALEALRIRK DDFLKLLADF
PEMAVEIMRV LADRLSQTTS ELTEARSRVQ RAEA