Gene Smed_4559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4559 
Symbol 
ID5318421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1046157 
End bp1047056 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content60% 
IMG OID640776360 
Productsulfate adenylyltransferase subunit 2 
Protein accessionYP_001313292 
Protein GI150376696 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 
TIGRFAM ID[TIGR02039] sulfate adenylyltransferase, small subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTTC CCCATCTTCG GCGGCTTGAA GCCGAAGCGA TCCATGTTAT TCGCGAAGTC 
GTTGCAACAT TCTCCAACCC CGTCGCCCTC TACTCAATCG GTAAGGACTC CTCCGTATTG
CTGCATCTGG CAATGAAGGC GTTCTATCCC GGAAAACCGC CCTTTCCATT CCTGCACGTC
GATACGAAAT GGAAGTTCCG GGAAATGATC GAGTTCCGTG ATCGGATGGC GCGAGAGCTC
GGCTTCGACC TGCTCGTCCA TGTCAATCAG GACGGGATCG ATCAGGGCAT CGGCCCCTTC
ACGCACGGCT CCAACGTTCA CACCCACGTC ATGAAGACGA TGGGACTGCG GCAGGCGCTG
GAGAAATACG GTTTCGACGC GGCGCTGGCG GGCGCGCGGC GGGACGAGGA GAAGTCACGC
GCCAAGGAGC GCATCTTTTC CATTCGCAGT GCCCAGCACG GCTGGGATCC GAAGCGTCAG
CGCCCCGAGA TGTGGAAAAC CTATAATACG CGGGTCGCGC CGGGTGAAAC GATGCGTGTC
TTCCCGCTCT CCAACTGGAC CGAATTCGAC ATCTGGCAAT ACATCCTGCG CGAGGACATT
CCGATCGTGC CGCTTTATTT CGCGGCCTGG CGGCCCGTCG TAAAGCGCGA CGGAACGCTG
ATCATGGTCG ACGATGAGCG GATGCCGATC CAGCCCGGAG AGGAGGTTCT TGAGCATCAG
GTGCGTTTCC GTACCCTCGG CTGCTATCCG CTGACCGGGG CGGTCGAGTC CGAGGCTGCC
ACGGTTCCCG ACATATTGCG GGAAATGCTG ACGGTCCGCA CGTCCGAACG ACAGAGCCGC
CTCATCGACT CGGATGAAGT CGGGGCAATG GAGAAAAAGA AGCGGGAGGG CTACTTCTGA
 
Protein sequence
MSLPHLRRLE AEAIHVIREV VATFSNPVAL YSIGKDSSVL LHLAMKAFYP GKPPFPFLHV 
DTKWKFREMI EFRDRMAREL GFDLLVHVNQ DGIDQGIGPF THGSNVHTHV MKTMGLRQAL
EKYGFDAALA GARRDEEKSR AKERIFSIRS AQHGWDPKRQ RPEMWKTYNT RVAPGETMRV
FPLSNWTEFD IWQYILREDI PIVPLYFAAW RPVVKRDGTL IMVDDERMPI QPGEEVLEHQ
VRFRTLGCYP LTGAVESEAA TVPDILREML TVRTSERQSR LIDSDEVGAM EKKKREGYF