| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4548 |
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| Symbol | |
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| ID | 5319049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1035643 |
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| End bp | 1036302 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640776349 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001313281 |
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| Protein GI | 150376685 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGTCT CTTTCATCGA TCAGCTTTGG CTCGCCCGCA TTCCGCTTTT CAAAGGGCTC
GGGATTTCCG TTTCGATCTC ATTTCTTTCT ATCGTCGCCG GCACGGTGTT GGGCGTTTTC
GTCGGTCTGG CGCTTGTCTA TGGATACAGG CCCGTCAGAT GGATCGTGCG CGGTTATACC
GATTTCATCC GCGGCACTCC GGTGCTCGTC CTGGTGCTCG CGAGCTATTA CGTCCTGAGC
GCCATTGGCA TCGATCTCGG GCCGTTCCAG GCCGGCGTTC TGGCGCTGGC CGTCTTCTGC
AGTTCGCATG TCGGCGAACT GGTGCGTGGC GCCCTGCAAT CGATCCCCAA AGGTCAGACC
GAGGCCGCCA AGGCGATCGG TCTGACCTTC GCCCAAACCT TCGCCTATGT GCTCGGCCCG
CAGGCGTTGC GGCAGGCGCT TCCGGCCTGG GTCAATACGG CGGCCGAGAT GGTCAAGGCA
TCGACCCTGC TTTCCATCAT TGGGGTCGGC GAATTGCTCC TGCGCACGCA GGAGGTGATC
TCCCGCACTT TCATGAGCCT CGAATTCTAT TTCTTCGCGG GCTTTCTCTA CTTCGTCATC
AACTACGGCA TTGAGCGCTT CGGCCGTTAC GTCGAGCGCA AGACCGCCGT TCCATCGTGA
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| Protein sequence | MEVSFIDQLW LARIPLFKGL GISVSISFLS IVAGTVLGVF VGLALVYGYR PVRWIVRGYT
DFIRGTPVLV LVLASYYVLS AIGIDLGPFQ AGVLALAVFC SSHVGELVRG ALQSIPKGQT
EAAKAIGLTF AQTFAYVLGP QALRQALPAW VNTAAEMVKA STLLSIIGVG ELLLRTQEVI
SRTFMSLEFY FFAGFLYFVI NYGIERFGRY VERKTAVPS
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