| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4536 |
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| Symbol | |
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| ID | 5317975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1024500 |
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| End bp | 1025369 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640776337 |
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| Product | hydroxymethylglutaryl-CoA lyase |
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| Protein accession | YP_001313269 |
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| Protein GI | 150376673 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.696155 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCGC CGGCAAGGGA GAGCGCCACG ATCGTCGAGA TGGCGCCGCG CGACGGCCTG
CAGAACGAGC CGCGGCTCGT GGCTACGGAG GACAAGATCA GGCTCGTCGA TCTGCTCTCC
GACTGCGGCT ACGGGCGCAT CGAAGTGACG AGTTTCGTCA GCCCGCGCTG GGTCCCGCAA
ATGGCCGACG CACCCGCCGT CATGACCGGC ATTCTTCGTC GCGCCGGCAC GCGCTACGCG
GCTTTGACGC CGAACATGCG CGGCTTCGAA GCGGCGCTTG CGGCGCGCGC GGACGAAGTA
GCGGTCTTCG CTTCCGCGTC GGAGAGCTTC TCCGAGAAGA ATATAAACTG CTCGATCGCC
GAGAGCATCG AGCGCTTTCG CCCGGTCGCC GAAGCCAGCC GGCGTCATGG CGTTCCCCTG
CGAGGCTATG TGAGCTGCGT GGTCGAATGC CCCTATGAGG GCGCGATCGC GCCGGCAGCG
GTCGCCCGCG TCACACGGTT GTTGGCCGAA CTAGGCTGCT ACGAGATCAG TCTCGGAGAT
ACGATCGGAA GCGGCACGCC CGAATCTGTC GATCGTATGC TGACAACGGT ACGCCGCGAG
GTCGATGCCA AGGCACTTGC CGGTCATTTT CACGATACAT CCGGCCGGGC GCTGGAGAAT
ATCGGGGTAG CACTGGAACA CGGCCTCAGG GTTTTCGACG CCTCCGCCGG CGGGCTCGGC
GGCTGTCCCT ATGCACCGGG CGCGGCCGGG AATGTCGATT CACTCGAGGT CCGCGCGTTT
CTCGAAACGC GGGGTTTTAA CACCGGGCTC GACCTTGAAA AGCTCGATCG CGCGGGTGCA
TTTGCACGAT CCTTGAGGAG CGCAGCATGA
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| Protein sequence | MTPPARESAT IVEMAPRDGL QNEPRLVATE DKIRLVDLLS DCGYGRIEVT SFVSPRWVPQ
MADAPAVMTG ILRRAGTRYA ALTPNMRGFE AALAARADEV AVFASASESF SEKNINCSIA
ESIERFRPVA EASRRHGVPL RGYVSCVVEC PYEGAIAPAA VARVTRLLAE LGCYEISLGD
TIGSGTPESV DRMLTTVRRE VDAKALAGHF HDTSGRALEN IGVALEHGLR VFDASAGGLG
GCPYAPGAAG NVDSLEVRAF LETRGFNTGL DLEKLDRAGA FARSLRSAA
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