| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4530 |
|---|
| Symbol | |
|---|
| ID | 5317969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 1017885 |
|---|
| End bp | 1018343 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640776331 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_001313263 |
|---|
| Protein GI | 150376667 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1396] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAA AGGATCCTAA CCCGATCGAC GCCTTTGTGG GCTCGCGTGT TCGCATGCGC
CGGTTGATGA TCGGCTTGAG CCAGGAAAAG CTTGCCGACG GGCTGGGCAT CACCTTCCAG
CAAGTCCAGA AATACGAGAA AGGCACAAAC CGCATCGGCG CCAGCCGGTT ACAGGCTATT
GCCGATATAC TCGGTGTGCA TCCGAGCTTT TTCTTTCAGC AGGAAGAAGG AAGCACTCAG
TCGGGCAGGC CCTCTGGCGA CATTCACGAA TCGCAGGAGA TCTCATCCTT CGTAGCCTCG
AAAGAGGGCA TCGCACTCAA TCGGGCCTTC CTTAAAATCG CCGACCCGGT GCTCCGGAAG
AAGATCATCT CCCTCGTCGC GGCGATGGCT CAATCGCCCG AATCGGACCA GACGCCGGCT
CAATCCGGCA CCCGGCACAC GGAACCTCTC CATGGCTGA
|
|---|
| Protein sequence | MNKKDPNPID AFVGSRVRMR RLMIGLSQEK LADGLGITFQ QVQKYEKGTN RIGASRLQAI
ADILGVHPSF FFQQEEGSTQ SGRPSGDIHE SQEISSFVAS KEGIALNRAF LKIADPVLRK
KIISLVAAMA QSPESDQTPA QSGTRHTEPL HG
|
|---|
| |