| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4525 |
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| Symbol | |
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| ID | 5318500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1011895 |
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| End bp | 1014357 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640776326 |
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| Product | nitrite reductase (NAD(P)H), large subunit |
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| Protein accession | YP_001313258 |
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| Protein GI | 150376662 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.927735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAA CTGCACTCGA AAAACTCGTC GTCGTCGGCA ACGGCATGGC TCCGGGCCGG
ATGCTGGAAG AGCTCTTCGA AAAGGCGCCC GGGCGCTACG CCGTGACCAT CTTCAACGCC
GAGCCGCGCG TCAATTACGA CCGCATCATG CTCTCTCCGG TACTATCCGG TGAAAAGGAC
TACGAAGAGA TCATCATCCA TGGCGACGGA TGGTACATCA AGCACGGGAT CACCCTATAC
AAGGGGCACA AGATCGTTGC GATTGATCGG GAGGCGAAAA CCGTAACCTC CGACCACGGC
GTCACCGAAA GCTACGACAA GCTGGTGATC GCCACCGGTT CCGTGCCCTT CATCATCCCC
GTGCCGGGCA AGGACCTGCG CGGCGTCATC ACCTATCGCG ATCTCGACGA TGTCCAAGCG
ATGCTGCTCG CGGCGCAATC GCGCGAAAAA GCCGTGGTCA TCGGCGGCGG CCTGCTTGGA
CTTGAGGCGG CCGCCGGCCT TCAGGCGCGC GGCATGGACG TCACCGTTCT GCACGTCATG
CCGACGCTGA TGGAGCGCCA GCTCGACCCC GCCGCGGGTT ATCTCCTGCA GAAGGCGGTC
GAGGAGCGCG GTATCAAGGT CCTGACCAAG GCCAACACCA AACGCATTCT GGGCGAGGAG
AAAGTCGAGG GCATCGAACT CGAGGACGGC CGGATCATTC CGGCGACGCT GGTCGTGATG
GCCGTCGGTA TCCGTCCGAA TGCAGGCCTT GCCAAGGAGG CCGGGCTCGC CGTCAACCGC
GGCATCGTCG TCGATGCCGG AATGCAGACG TCCGACGGGA ACATCATGGC GCTGGGCGAG
TGTGCCGAAG TCGGCGGCAT GGTCTACGGT CTCGTCGCGC CACTCTACGA GATGGCACGC
GTCGCCGCGT CTCACCTCGC AGGCGACCGT CGCGCTGCCT TCGCTCACTC CGACACCCCG
ACGAAACTGA AGGTCACGGG GATCAACCTC TATTCCGTGG GCGACTTCGC CGATGGCGAC
GGACGTGAAG AAATCGTGCT ACGCGATGCC ACCGCCGGCA TCTACAAGCG GCTGGTTCTC
AAGGAGAACC GGATCGTCGG CGCAGTGCTT TATGGCGATA CCGGTGACGG TGCCTGGTTC
AATGACCTCT TGAAGCGCGG CACCGATATT TGCGAGTTGC GTGACACACT GATTTTCGGC
CAGGCCTACC AGGGAGGATC TCCGCTGGAC CCTATGGCGG CCGTTGCAGC CTTGCCGGAT
GATGCGGAAA TCTGCGGCTG CAACGGCGTG TGCAAGGGCA AGATCGTCGG GGCTATCACC
TCCAAGGGGC TGACCTCGCT CGACGACGTA CGTGCCCACA CCAAGGCGTC CGCCTCCTGC
GGCTCCTGTA CGGGCCTCGT CGAACAGATC ATGTCGCTGA CGCTTGGTGA CAGCTACAAC
CCGGCCGCTG TACAGCCGAT GTGCAACTGC ACCGATCTCG GCCATGACGA CGTGCGGCGC
TTGATCAAGG CGAAGAAGCT GAAGACGATC CCCGCCGTCA TGCAGGAACT CGAATGGAAG
ACCTCCTGCG GCTGCGCAAA GTGTCGTCCG GCCCTCAATT ACTACCTCGT CTGCGATTGG
CCGGATGAAT ATGCCGACGA CTACCAGTCG CGCTTCATCA ATGAACGCGT TCACGCCAAT
ATCCAGAAGG ACGGCACCTA TTCCGTTGTA CCCCGCATGT GGGGCGGCGT CACCAATTCC
AGGGAGCTTC GGGCGATCGC CGACGTCGCA GACAAGTTCA ACGTGCCGCT TGTAAAGGTG
ACCGGCGGCC AGCGCATCGA TCTGCTTGGC ATCGAGAAGG AGGACCTGCC CGCCGTTTGG
GCAGACCTCA ACAAAGCGGG CTTCGTCTCC GGGCAGGCTT ACGCCAAGGG GCTCAGAACC
GTGAAGACCT GTGTCGGCTC CGATTGGTGC CGCTTCGGCA CTCAGAATTC GACCGGGCTT
GGCATCCGCA TCGAGAAATT CATGTGGGGC TCCTGGACCC CGGCGAAGCT GAAGATGGCG
GTCTCCGGCT GCCCCCGCAA TTGCGCGGAG GCGACCTGCA AGGATATCGG CGTCATCTGC
GTCGACTCCG GCTACGAGAT TCACTTCGCA GGTGCCGCCG GTCTCGACAT AAAGGGAACC
GAAGTCCTGG GGCTGGTCAA AACCGAGGAC GAGGCGCTCG AACATATCGT CGCGCTGACG
CAGATGTATC GTGAGCAGGC CCGCTATCTC GAGCGCATCT ACAAATGGGC AAAGCGCGTC
GGCCTCGACG AGATCCGCCG GCAGATCATG GGCGATGCGG AAAGGCGCAA GGCCTATTTC
GACCGCTTCG TCTTCAGCCA GAAATTCGCT CAGGTCGACC CTTGGTCAGA GCGCGTCTCC
GGCAAGGACA AGCACGAGTT CCGGCCGATG GCGACGGTCG GCTTCAATCA GGCAGCGGAG
TGA
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| Protein sequence | MTETALEKLV VVGNGMAPGR MLEELFEKAP GRYAVTIFNA EPRVNYDRIM LSPVLSGEKD
YEEIIIHGDG WYIKHGITLY KGHKIVAIDR EAKTVTSDHG VTESYDKLVI ATGSVPFIIP
VPGKDLRGVI TYRDLDDVQA MLLAAQSREK AVVIGGGLLG LEAAAGLQAR GMDVTVLHVM
PTLMERQLDP AAGYLLQKAV EERGIKVLTK ANTKRILGEE KVEGIELEDG RIIPATLVVM
AVGIRPNAGL AKEAGLAVNR GIVVDAGMQT SDGNIMALGE CAEVGGMVYG LVAPLYEMAR
VAASHLAGDR RAAFAHSDTP TKLKVTGINL YSVGDFADGD GREEIVLRDA TAGIYKRLVL
KENRIVGAVL YGDTGDGAWF NDLLKRGTDI CELRDTLIFG QAYQGGSPLD PMAAVAALPD
DAEICGCNGV CKGKIVGAIT SKGLTSLDDV RAHTKASASC GSCTGLVEQI MSLTLGDSYN
PAAVQPMCNC TDLGHDDVRR LIKAKKLKTI PAVMQELEWK TSCGCAKCRP ALNYYLVCDW
PDEYADDYQS RFINERVHAN IQKDGTYSVV PRMWGGVTNS RELRAIADVA DKFNVPLVKV
TGGQRIDLLG IEKEDLPAVW ADLNKAGFVS GQAYAKGLRT VKTCVGSDWC RFGTQNSTGL
GIRIEKFMWG SWTPAKLKMA VSGCPRNCAE ATCKDIGVIC VDSGYEIHFA GAAGLDIKGT
EVLGLVKTED EALEHIVALT QMYREQARYL ERIYKWAKRV GLDEIRRQIM GDAERRKAYF
DRFVFSQKFA QVDPWSERVS GKDKHEFRPM ATVGFNQAAE
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