Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4451 |
Symbol | |
ID | 5318603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 935103 |
End bp | 936311 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640776253 |
Product | major facilitator transporter |
Protein accession | YP_001313186 |
Protein GI | 150376590 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.915935 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAATCG GGACCGACAC CATGACGCTG ACCTACAACG AGAACATCCA TAGCAGGCCC AGGGCCTGGG GCGCCGTGTT CTCCATGACA TTGTGCGTAT TCGTGCTGAT CGCTTCGGAG TTCATGCCCG TGAGCCTGCT GACGCCGATC GCCGCTGATC TCGGTGTTTC AGAAGGGAGT GCGGGCCAGG CAATCTCCAT CTCAGGCATC TTCGCGGTTT TCACCAGCCT CTTCATTGCC GCGCTGACCC GGCGGCTCGA TCGGCGCGTG GTCGTGCTGG CCTTGACGTT TCTGCTGATG CTGTCTGGGG TCGCGGTTAC CTTTGCGCCT TCCTATCCCA TGCTGATGCT GGGTCGCGCG CTGCTTGGAA TTTCCATCGG CGGCTTCTGG TCGATGTCCA CGTCGATCGT GATGCGTCTC GTCTCCCGCG ACCAGGTGCC GAAGGCACTT GCACTGCTCA ATGCGGGCAA TGCGATCGCG GCCACCATCT CCGCACCCCT GGGAAGTCTC CTCGGGTCCT ATATCGGGTG GCGCGGCGCC TTCTTTCTCG TGGTTCCCGT GGGCTTGCTT GCGCTTATCT GGCAATGGAT CAGCCTGCCG ACGCTTTCGC CCCGGCGCGA TGGCGCATCC CGGAACGTCC TCCGGCTGCT GGCGCGTCCA CCCGTCGCAT TGGGCATGGC AGCAATCCTG CTGCTGTTCA TGGGGCAGTT TGCTTTCTTC ACTTATCTGC GGCCGTTCCT GGAGCAGGTG ACCCACCTTG GCATCGAGAC GCTCTCGCTC ATGCTTCTCG TGATGGGATT GTCGGGAGTG GCCGGAACAT CGCTCGTCGG CCGGCTGCTG ACTCATCGCC TGTTCAGCAT TCTCATCGTC ATTCCGTTCC TCATGGCCTG TATCGCTTTG GCAATGATTG GCATCGGTGA GATGAGGACC CCTGTCGTCA TGTCCCTCAT CGGTTGGGGT TTTCTCGGGA CCGCAGCGCC GGTGGCCTGG GGCACCTGGC TGAGCCGTGT TCTTGCCGAT GATGCTGAGG CAGGCGGTGG ACTCCAGGTC GCTGTGATCC AGCTCGCCAT CACCGCCGGA GCGTCTCTCG GCGGACTTCT CTTCGACGCT CTCGGCTGGT GGTCGACCTT CTCGCTCAGC GCCCTGCTTC TGTTCGGCTC TTCCCTGGCG TCCTTCGCCG CATGGCTTTC GGCCAGGAGA GCATCATGA
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Protein sequence | MPIGTDTMTL TYNENIHSRP RAWGAVFSMT LCVFVLIASE FMPVSLLTPI AADLGVSEGS AGQAISISGI FAVFTSLFIA ALTRRLDRRV VVLALTFLLM LSGVAVTFAP SYPMLMLGRA LLGISIGGFW SMSTSIVMRL VSRDQVPKAL ALLNAGNAIA ATISAPLGSL LGSYIGWRGA FFLVVPVGLL ALIWQWISLP TLSPRRDGAS RNVLRLLARP PVALGMAAIL LLFMGQFAFF TYLRPFLEQV THLGIETLSL MLLVMGLSGV AGTSLVGRLL THRLFSILIV IPFLMACIAL AMIGIGEMRT PVVMSLIGWG FLGTAAPVAW GTWLSRVLAD DAEAGGGLQV AVIQLAITAG ASLGGLLFDA LGWWSTFSLS ALLLFGSSLA SFAAWLSARR AS
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