| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4436 |
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| Symbol | |
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| ID | 5317958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 924723 |
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| End bp | 926021 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640776238 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001313171 |
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| Protein GI | 150376575 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.506103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.992693 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATTTCG TGCAGATTTT TCGCCCGCTT GAGGCCTGGT TCCGGACATT CGTGCTCAGC
GAATGGACAT TCTACCAGCT TGGGATAATC GCGGCCGGTT ATATTTTCGC CTCCCTCGTC
GCCTCCATAA CCGAGCCGGC ATTGGAGACC AGGGCTCGCC GCATCAAGGG CAACCCGGAT
CTGCTGCGTG TGATCATCGC CTTCATGCGC CGCCTGAAAT GGCTTTTTCT GACCATCTGG
CTGTGGCTTG CCAACGTCGT TCTCACACAG AGTACGTGGC CATCGCAGCG ATGGCTTGTC
TCGACCGCGC TGACTCTGGC GGCCGCCTGG TTCGTCATTT CCGTGCTGAC CAAGATCATC
CGCAACCAGA CACTGTCGCG CGTGGTCGCC GTCCTGAGCT GGGGCTACCT TGCGGTTTAT
GCCACCGGCC TCGAAGGCCC CGCCCTGTCG ACGCTGGACG CGGCCGCCGT CAATCTGGGC
GCGATGCGCC TTTCGCTGCT GATCGTCCTC AAGGCAGTCG TTCTGACGGT CGCTCTCATC
TGGGTCGCAG TGCTCGCCGG CAACGTGCTT TCCCACTGGG TTCAACGTTC GGGCGACCTT
TCGCCGTCGT TCAAAGTGCT GATCAGCAAG CTCATCAAGA TCGTTCTGAT CATGGTCGCC
GGCGCAATCG CATTGTCCGC GACGGGTATC GACCTCACGG CGCTAACGGT CTTTTCGGGT
GCTGTCGGTG TCGGAGTAGG CTTCGGACTG CAGAAGGTCG TATCCAATTT CATTTCCGGG
ATCATCATCC TGCTCGACAA GTCGATCAAG CCCGGCGACA CGATCACGCT TGGAGACACG
TTCGGATCCA TTCGCGACCT GCGTGCGCGT TTTGTGTCGG TCATCACCCG CGAGGGGAAG
GAATTCCTCA TCCCCAATGA GGACTTCATC TCGCAGCAGG TGGTGAACTG GTCCTTCTCC
AGCGATTACG TCCGTATAGA CGTCGATTTC GGCACGTCCT ACGACAGCGA TCCGCATGAG
GTGGTGCGGA TTGCCATCGA AACCGCATCT GCCGTTCCCC GCGTCGCCAA CAACTACAAG
GCGCCTGTCT GCTGGATGAC GGCGTTCGGT GCCTCCTCGC TGGATTTCCG CCTGCGCTTC
TGGATCTCGG ATCCGGCCAA CGGTTTGACG AATGTACGCG GCCAGGTTCT GCTGGCATTA
TGGGATGCGT TCAAAGCGGC GAAGGTATCA ATCCCCTTCC CGCATCGAGA GATCATCATG
AAGACGCCGG TGGAGATTCA GCGGCCGCCA CGAGCATAG
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| Protein sequence | MDFVQIFRPL EAWFRTFVLS EWTFYQLGII AAGYIFASLV ASITEPALET RARRIKGNPD
LLRVIIAFMR RLKWLFLTIW LWLANVVLTQ STWPSQRWLV STALTLAAAW FVISVLTKII
RNQTLSRVVA VLSWGYLAVY ATGLEGPALS TLDAAAVNLG AMRLSLLIVL KAVVLTVALI
WVAVLAGNVL SHWVQRSGDL SPSFKVLISK LIKIVLIMVA GAIALSATGI DLTALTVFSG
AVGVGVGFGL QKVVSNFISG IIILLDKSIK PGDTITLGDT FGSIRDLRAR FVSVITREGK
EFLIPNEDFI SQQVVNWSFS SDYVRIDVDF GTSYDSDPHE VVRIAIETAS AVPRVANNYK
APVCWMTAFG ASSLDFRLRF WISDPANGLT NVRGQVLLAL WDAFKAAKVS IPFPHREIIM
KTPVEIQRPP RA
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