| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4423 |
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| Symbol | |
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| ID | 5318987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 915892 |
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| End bp | 917313 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640776226 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_001313159 |
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| Protein GI | 150376563 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.904496 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGAGG TATCGGCCCG CAAAATTTTT CAATGCGCGG CGGGACACGC CGCGCGGTTC
CGCGAGAAGA TAACGGAGCT TCCGCAACGG CCGGAGCTAT CCTATCCGGC AGCGCTGGCG
ACCTTTCGCG AGGCGCTGCC GGAACAGGGA AGCGCCGGTG CCGAAGTAAT CGGCGACCTT
GCCGCGAAGG CTGAACCCGG GCTCCACGCT ATGGTCGGGC CGCGTTTCTT CGGGTGGGTC
ATCGGCGGTT CGCATCCGGT CGGGGTTGCG GCGGACTGGA TGACCAGCGC CTGGGGCCAG
AACGCCGGCA ACCACCATGC TGCGCCGGCC GCCGCCGCTG CGGAAGCGGT CGCGGCGAAC
TGGCTGCTCG ACCTTCTCGA CCTGCCGCGG GAAAGTTCCG TCGGGTTTGC GACCGGGGCG
ACTCTCGCCA ATTTCATCTG CCTTGCCGCC GCGCGCGGAG AGGTGCTGCG GCAGTGCGGA
TGGGACGTCG AGGCGCAGGG CCTCTTTGGC GCGCCGCCGG TCTCGGTACT CATCGGCGAC
GATGCGCATG CGACGGTTTT TTCGGCGCTG CAGTTTCTGG GTTTCGGGCA CGACCGCGTC
GTTCGCGTGG AGACCGATCA CACGGGCCGC ATTGCCGCAC CGGCATTCGC GGGCGCAGCC
ACGAAGATGA CCGGTCCCTG CATTGCAATA TTCCAGGCAG GGCAGATCAA TACGGGTGCC
TTCGACGATT TCAGCGGGAT CATGCCGATT GCCCGAGATA TAGGCGCCTG GGTTCATGTC
GACGGCGCAT TCGGCCTCTG GGCGCGCGCC GCGCCCAGCA AACGGGCGCT GACGAAGAGC
GCCGAGCAGG CCCACTCCTG GGCGACCGAC GGCCACAAAT GGCTGCAGAC GCCCTACGAC
TGCGGATATG CCATCATTCG CGATCAGGAG GCGCATCGTC GGGCGATGAC GATCGCCGCG
AGCTACCTGC CGCCAAGTGA CGAAGGCGAA CGGGACCCAA GCCATTTCGT GCCCGAACTG
TCGCGCCGAG CTCGCGGCTT TGCCACCTGG GCGATGATCA AACATCTTGG CCGCGAGGGC
ATCGCCGCCA TGGTCGACCG CCATTGCCGT GTCGCCCGTG CCATCGCCGA ACGGTTGACC
GTAGAAGACG GGATAAATGT TCTAAACGAA GTCGTCCTCA ATCAGGTCCT CGTGCGCTTC
GGAGCGGCAT TGCCCGGCGA AGAATCCGAC CGGCTGACCC AGGCGGCGAT CGCCCGGTTG
CAGGCCGACG GTACCTGTTT CGCCGGCGGC GCCGTCTGGC GCGGACGCAA GGTGATGCGA
CTTTCGGTCA TCTCATGGCT GACGGACGAT CAAGCGGGCG AGATGACTGC CGAGGCGATC
ATTGCCACCT GGCGTGCGGT TCGCGGTGGA ACGTTGGTTT GA
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| Protein sequence | MEEVSARKIF QCAAGHAARF REKITELPQR PELSYPAALA TFREALPEQG SAGAEVIGDL
AAKAEPGLHA MVGPRFFGWV IGGSHPVGVA ADWMTSAWGQ NAGNHHAAPA AAAAEAVAAN
WLLDLLDLPR ESSVGFATGA TLANFICLAA ARGEVLRQCG WDVEAQGLFG APPVSVLIGD
DAHATVFSAL QFLGFGHDRV VRVETDHTGR IAAPAFAGAA TKMTGPCIAI FQAGQINTGA
FDDFSGIMPI ARDIGAWVHV DGAFGLWARA APSKRALTKS AEQAHSWATD GHKWLQTPYD
CGYAIIRDQE AHRRAMTIAA SYLPPSDEGE RDPSHFVPEL SRRARGFATW AMIKHLGREG
IAAMVDRHCR VARAIAERLT VEDGINVLNE VVLNQVLVRF GAALPGEESD RLTQAAIARL
QADGTCFAGG AVWRGRKVMR LSVISWLTDD QAGEMTAEAI IATWRAVRGG TLV
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