Gene Smed_4419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4419 
Symbol 
ID5318983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp911823 
End bp912890 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content64% 
IMG OID640776223 
Producttransport system permease protein 
Protein accessionYP_001313156 
Protein GI150376560 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.347706 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA TTGCCGAGGA AATCGCAGGC ATCGAAGGGC GCGGTCGCTA CCGCGCTCTC 
GTCGTTCGCC GGCTCGTCAT GCTGTCCGGT CTGCTTGCAG CGCTTTTCGT CTCCGTGGCC
GTCGACATGG CGCTCGGCCC GGCGAACTAC CCGCTTTCAG ACGTCCTGAC CGCGCTGTTT
TGGGCCGAGA CTGTGGGCGA CCAGCTCCGC GTGGTGATCT GGGACATACG CATGCCGATT
GCACTGATGG CGGTGACGGT CGGCGCCTCG CTGTCACTTG CCGGCGCGCA GATGCAGACT
ATTCTGGCCA ATCCCTTGGC GAGCCCGTTC ACGCTCGGCA TTTCGGCAGC TGCCGGCTTC
GGAGCAGCAC TCGGGCTCGT TGCCGGCGTT GCTGTTTTCC CGGTCGCCGT TCAGTACATG
GTGCCAATCA ACGCCTTCCT GATGGCGATG GTGGCGGCGC TTTTCATTCA TTTTGCCTCA
ACCATGCGCG GCGTCACCGT CGAAACGATC GTCCTACTCG GTATCGCGCT CGTCTTCACA
TTCAATGCGG CCCTGTCGCT GCTCGAATAT CTCGCCTCCG AACAGGCGCT CGCGGCGGTC
GTGTTCTGGA CCATGGGGAG CCTCACCAAG GCAACCTGGC CGAAGGTCTG GGTTACCGCC
GCGGTGCTGC TCGTCGCGGT GCCGGTCTTC GCGCGCCGCG CCTGGGCGCT GACGGCGCTG
AGGCTCGGTG AAGACAAGGC GGCGAGCTTC GGCATCGATG TCGGGCGGCT CAGGCTCGAA
ACGATGCTCA CGGTAAGCCT GCTTGCCGCG ATACCGGTCT CCTTCGTCGG CACGATCGGC
TTCGTCGGCC TCGTAGGGCC GCATATTGCC CGCATGCTTG TCGGTGAAGA CCAGCGCTTC
TTCCTGCCGG CCTCCGTCCT CTGCGGCTCG CTGCTGCTTT CCGTCACATC CGTCGTCAGC
AAGACGCTCA TTCCCGGTGC CGTGCTGCCG ATCGGCATCA TCACGGCGCT CGTCGGCGTT
CCCTTCTTCT TCGTGCTGAT ATTCACCAAT AGGAAGCGCG CATGGTAA
 
Protein sequence
MTAIAEEIAG IEGRGRYRAL VVRRLVMLSG LLAALFVSVA VDMALGPANY PLSDVLTALF 
WAETVGDQLR VVIWDIRMPI ALMAVTVGAS LSLAGAQMQT ILANPLASPF TLGISAAAGF
GAALGLVAGV AVFPVAVQYM VPINAFLMAM VAALFIHFAS TMRGVTVETI VLLGIALVFT
FNAALSLLEY LASEQALAAV VFWTMGSLTK ATWPKVWVTA AVLLVAVPVF ARRAWALTAL
RLGEDKAASF GIDVGRLRLE TMLTVSLLAA IPVSFVGTIG FVGLVGPHIA RMLVGEDQRF
FLPASVLCGS LLLSVTSVVS KTLIPGAVLP IGIITALVGV PFFFVLIFTN RKRAW