Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4419 |
Symbol | |
ID | 5318983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 911823 |
End bp | 912890 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640776223 |
Product | transport system permease protein |
Protein accession | YP_001313156 |
Protein GI | 150376560 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.347706 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGCCA TTGCCGAGGA AATCGCAGGC ATCGAAGGGC GCGGTCGCTA CCGCGCTCTC GTCGTTCGCC GGCTCGTCAT GCTGTCCGGT CTGCTTGCAG CGCTTTTCGT CTCCGTGGCC GTCGACATGG CGCTCGGCCC GGCGAACTAC CCGCTTTCAG ACGTCCTGAC CGCGCTGTTT TGGGCCGAGA CTGTGGGCGA CCAGCTCCGC GTGGTGATCT GGGACATACG CATGCCGATT GCACTGATGG CGGTGACGGT CGGCGCCTCG CTGTCACTTG CCGGCGCGCA GATGCAGACT ATTCTGGCCA ATCCCTTGGC GAGCCCGTTC ACGCTCGGCA TTTCGGCAGC TGCCGGCTTC GGAGCAGCAC TCGGGCTCGT TGCCGGCGTT GCTGTTTTCC CGGTCGCCGT TCAGTACATG GTGCCAATCA ACGCCTTCCT GATGGCGATG GTGGCGGCGC TTTTCATTCA TTTTGCCTCA ACCATGCGCG GCGTCACCGT CGAAACGATC GTCCTACTCG GTATCGCGCT CGTCTTCACA TTCAATGCGG CCCTGTCGCT GCTCGAATAT CTCGCCTCCG AACAGGCGCT CGCGGCGGTC GTGTTCTGGA CCATGGGGAG CCTCACCAAG GCAACCTGGC CGAAGGTCTG GGTTACCGCC GCGGTGCTGC TCGTCGCGGT GCCGGTCTTC GCGCGCCGCG CCTGGGCGCT GACGGCGCTG AGGCTCGGTG AAGACAAGGC GGCGAGCTTC GGCATCGATG TCGGGCGGCT CAGGCTCGAA ACGATGCTCA CGGTAAGCCT GCTTGCCGCG ATACCGGTCT CCTTCGTCGG CACGATCGGC TTCGTCGGCC TCGTAGGGCC GCATATTGCC CGCATGCTTG TCGGTGAAGA CCAGCGCTTC TTCCTGCCGG CCTCCGTCCT CTGCGGCTCG CTGCTGCTTT CCGTCACATC CGTCGTCAGC AAGACGCTCA TTCCCGGTGC CGTGCTGCCG ATCGGCATCA TCACGGCGCT CGTCGGCGTT CCCTTCTTCT TCGTGCTGAT ATTCACCAAT AGGAAGCGCG CATGGTAA
|
Protein sequence | MTAIAEEIAG IEGRGRYRAL VVRRLVMLSG LLAALFVSVA VDMALGPANY PLSDVLTALF WAETVGDQLR VVIWDIRMPI ALMAVTVGAS LSLAGAQMQT ILANPLASPF TLGISAAAGF GAALGLVAGV AVFPVAVQYM VPINAFLMAM VAALFIHFAS TMRGVTVETI VLLGIALVFT FNAALSLLEY LASEQALAAV VFWTMGSLTK ATWPKVWVTA AVLLVAVPVF ARRAWALTAL RLGEDKAASF GIDVGRLRLE TMLTVSLLAA IPVSFVGTIG FVGLVGPHIA RMLVGEDQRF FLPASVLCGS LLLSVTSVVS KTLIPGAVLP IGIITALVGV PFFFVLIFTN RKRAW
|
| |