Gene Smed_4340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4340 
SymbolminC 
ID5319210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp838320 
End bp839108 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content64% 
IMG OID640776145 
Productseptum formation inhibitor 
Protein accessionYP_001313078 
Protein GI150376482 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0850] Septum formation inhibitor 
TIGRFAM ID[TIGR01222] septum site-determining protein MinC 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.255105 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGCC TACATCTTGG CAACCAAAAA TTAACGAAGA TGACCAAAGT GCTAACAGAC 
GCTCGCTCGA TCCGCATCAA GGGCCGCTCC TTCCTGGCGC TGGTGCTCTC CCCGGAACTG
CCGCTCGACT GGTGGCTCGG CCGGCTTGAC GACCTCGCTT CCCGTTCGGC GGGTTTCTTC
CTGGGCCGCC CGGTGGTGCT GGACGTGGCG GACCTCGAAA TCGACCGGAA GCAGTTGAAA
AGCCTGCTGG AAGAACTCGG CCAACGCAAT GTCAGGGTCA TGGGAATCGA AGGCGGGCGT
CCCTCGCTTT TCGAACCGGG AATGCCGCCC GCTATGAAAG GCGGCCGGCC GGCGCCGGAT
TTCGAAGTGC CTGAGGCAAA TCCGGCGGAA TCACCGAAGG CCGGCAAGGG GAAAGCCGCC
GCGCCGGTCA TCACGGAAGA GGTTCAGCCG GTTCGGGCGA CGGCTTCGAT CATTGTTCGC
GAGCCGGTGC GGTCGGGACA ATCGGTCATC TTCCCGGAAG GCGACGTGAC GGTGGTCGGC
TCGGTGGCGT CAGGCGCGGA AATCGTCGCA GGAGGTTCGG TCCACATCTA CGGGACGCTC
AGGGGGCGGG CGCTGGCCGG CTCGGTGGGA AATGCCTCTG CGCGCATCTT CTGCCGCAGG
CTCGAAGCGG AGCTGCTGGC GATCGACGGC GTCTACAAGA CCGCCGAAGA CATGGCGCCG
AACCTGCGAG GGCAGTCGGT GCAACTCTGG CTGGAAGGCG ATTCGATCAT GGCAGAGAGA
CTTAACTGA
 
Protein sequence
MARLHLGNQK LTKMTKVLTD ARSIRIKGRS FLALVLSPEL PLDWWLGRLD DLASRSAGFF 
LGRPVVLDVA DLEIDRKQLK SLLEELGQRN VRVMGIEGGR PSLFEPGMPP AMKGGRPAPD
FEVPEANPAE SPKAGKGKAA APVITEEVQP VRATASIIVR EPVRSGQSVI FPEGDVTVVG
SVASGAEIVA GGSVHIYGTL RGRALAGSVG NASARIFCRR LEAELLAIDG VYKTAEDMAP
NLRGQSVQLW LEGDSIMAER LN