Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4299 |
Symbol | |
ID | 5319303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 793014 |
End bp | 793787 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640776104 |
Product | exodeoxyribonuclease III Xth |
Protein accession | YP_001313037 |
Protein GI | 150376441 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.231101 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.275572 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCG CGACCTTCAA CATCAACGGT GTGAACAAGC GACTCGACCA CCTCCTGATC TGGCTAGCAG CGGCTGGGCC GGACGTGGTC TGTCTGCAGG AGCTCAAGGC GACGGACGGA CAGTTCCCCG AGGCTGCGAT CGAGGCGGCC GGTTACGGTG CCGTCTGGCT GGGCCAGACA GCCTGGAACG GCGTTGCAAT TCTTGCCCGC GGCTGCGAAC CGGTCCTCAC GCGAACAGGC TTGCCCGGCG ATCCGTCCGA TACGCAGAGC CGCTACATCG AGGCCGCGGT GAACGGCATC CTGATCGCCT CGCTCTATGC GCCCAACGGC AATCCGCAGC CCGGCCCGAA ATTCGACTAT AAGCTCGCCT GGCACCAACG CCTCAATCTG CACGCTGCCG CGCTTCTCGA AGCGCGCGTT CCGGTGTTAC TCGCGGGCGA CTACAATGTC GTCCCGGAAC CGCGCGACAT CTATCCGACC CGCTCCTACG ACGGCAACGC TCTCGTCCAG CCGGAAAGCC GCGCAGCGTT CAAGAGCCTT GTTGAACAGG GATGGCTCGA CGCACTTCGT AAGGTCCACC CGCAGGCGCA GCTTTTCACC TTCTGGGATT ATCGCCGGAA CCGCTGGCAG CGCGACGCCG GCCTTCGCCT CGACCACATT CTCCTGAGCG GAAAGCTCAA GCGCCGGCTG ACCGGCGCCG GAATCGATCG CGAAATCCGC GGGCTTGAAG GGGCAAGCGA CCATGCGCCG GTCTGGATCA CATTGCGCGA GTAG
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Protein sequence | MKIATFNING VNKRLDHLLI WLAAAGPDVV CLQELKATDG QFPEAAIEAA GYGAVWLGQT AWNGVAILAR GCEPVLTRTG LPGDPSDTQS RYIEAAVNGI LIASLYAPNG NPQPGPKFDY KLAWHQRLNL HAAALLEARV PVLLAGDYNV VPEPRDIYPT RSYDGNALVQ PESRAAFKSL VEQGWLDALR KVHPQAQLFT FWDYRRNRWQ RDAGLRLDHI LLSGKLKRRL TGAGIDREIR GLEGASDHAP VWITLRE
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