Gene Smed_4281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4281 
Symbol 
ID5319117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp773358 
End bp774110 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content64% 
IMG OID640776086 
ProductNmrA family protein 
Protein accessionYP_001313019 
Protein GI150376423 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG TCGTCATCGG AGGCACCGGC CTCATCGGAT CGAAGCTTGT AGGCAACCTT 
CGCGAGCGCG GCCATGACGT GCTTGCAGCC GCCCCCAATA CAGGCGTGAA CACCATCACT
CGCGAGGGAT TGGCGGAAGC GCTGAACGGC GCGGATGTCG TCGTCGATGT TGCCAACGCG
CCGGTATGGG AGGATAAGGC CGTCCTCGAC TTCTTCGAAA CCTCGGGCCG GAACCTGCTG
GCGGCGGAAG CTGCCGCCGG CGTCCGCCAT CACATAGCCC TGTCGATCGT CGGTAGCGAG
CGGCTTCCAG ACAACGGCTA TTTCCGCGCG AAGGTCGCGC AGGAAAACCT CATAAAGGCA
TCCGGTATCC CATACACCAT CCTGCGTGCC ACGCAGTTCT TCGAATTTGT CGGCGGCATC
GCGCAATCGG CCACCGCCGG CCAGGAGATT CGCCTGTCGC CTGCGCTGAT CCAGCCGATC
GCCTCAGACG ACGTGGCGGA AGCGCTCGCC GATGTCGCGG TCGCACTGCC GGTCAACGGC
ACGATCGAAA TCGCCGGTCC CGAGGCGATA CCGCTCGATG AACTGGTCAG ACGCTTCCTG
CGGGCGACCG AGGACCAGCG CAAGGTCCTG CCCGATGTCC ATGCGCGCTA CTTCGGCGCC
GTTCTCGACG ATCAATCGCT GACCCCCGGG GATAACCCGC GCATCGGTGC GATCCGGTTC
GAGGATTGGC TCGGCCGGCA AGCCGCCGGC TGA
 
Protein sequence
MKIVVIGGTG LIGSKLVGNL RERGHDVLAA APNTGVNTIT REGLAEALNG ADVVVDVANA 
PVWEDKAVLD FFETSGRNLL AAEAAAGVRH HIALSIVGSE RLPDNGYFRA KVAQENLIKA
SGIPYTILRA TQFFEFVGGI AQSATAGQEI RLSPALIQPI ASDDVAEALA DVAVALPVNG
TIEIAGPEAI PLDELVRRFL RATEDQRKVL PDVHARYFGA VLDDQSLTPG DNPRIGAIRF
EDWLGRQAAG