Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4281 |
Symbol | |
ID | 5319117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 773358 |
End bp | 774110 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640776086 |
Product | NmrA family protein |
Protein accession | YP_001313019 |
Protein GI | 150376423 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCG TCGTCATCGG AGGCACCGGC CTCATCGGAT CGAAGCTTGT AGGCAACCTT CGCGAGCGCG GCCATGACGT GCTTGCAGCC GCCCCCAATA CAGGCGTGAA CACCATCACT CGCGAGGGAT TGGCGGAAGC GCTGAACGGC GCGGATGTCG TCGTCGATGT TGCCAACGCG CCGGTATGGG AGGATAAGGC CGTCCTCGAC TTCTTCGAAA CCTCGGGCCG GAACCTGCTG GCGGCGGAAG CTGCCGCCGG CGTCCGCCAT CACATAGCCC TGTCGATCGT CGGTAGCGAG CGGCTTCCAG ACAACGGCTA TTTCCGCGCG AAGGTCGCGC AGGAAAACCT CATAAAGGCA TCCGGTATCC CATACACCAT CCTGCGTGCC ACGCAGTTCT TCGAATTTGT CGGCGGCATC GCGCAATCGG CCACCGCCGG CCAGGAGATT CGCCTGTCGC CTGCGCTGAT CCAGCCGATC GCCTCAGACG ACGTGGCGGA AGCGCTCGCC GATGTCGCGG TCGCACTGCC GGTCAACGGC ACGATCGAAA TCGCCGGTCC CGAGGCGATA CCGCTCGATG AACTGGTCAG ACGCTTCCTG CGGGCGACCG AGGACCAGCG CAAGGTCCTG CCCGATGTCC ATGCGCGCTA CTTCGGCGCC GTTCTCGACG ATCAATCGCT GACCCCCGGG GATAACCCGC GCATCGGTGC GATCCGGTTC GAGGATTGGC TCGGCCGGCA AGCCGCCGGC TGA
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Protein sequence | MKIVVIGGTG LIGSKLVGNL RERGHDVLAA APNTGVNTIT REGLAEALNG ADVVVDVANA PVWEDKAVLD FFETSGRNLL AAEAAAGVRH HIALSIVGSE RLPDNGYFRA KVAQENLIKA SGIPYTILRA TQFFEFVGGI AQSATAGQEI RLSPALIQPI ASDDVAEALA DVAVALPVNG TIEIAGPEAI PLDELVRRFL RATEDQRKVL PDVHARYFGA VLDDQSLTPG DNPRIGAIRF EDWLGRQAAG
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