| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4275 |
|---|
| Symbol | |
|---|
| ID | 5319037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 764210 |
|---|
| End bp | 765205 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640776080 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001313013 |
|---|
| Protein GI | 150376417 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.122751 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTGCT CTGCCCGAAT ATGCGAATGG CTGGCCGAGA ACGTTCCCGC GGAGACGCGG
TCCCGCTTTG AAGGAATCGA ACCGATGGCC GTCGACAGTG TCCCCGGCAA ACTTTCGCAT
GAAAATGGAA CCGCCCGCGC CGGCGTGATC GTCATGCTCC TCGGCATGCT CATGTTTTCG
GTAAACGACG TCATGGGAAA GTGGCTGGTA GCCACCTACT CGGTCGGTCA GGTGGTGCTG
ATCCGCAGCA TCGCAGCGGT CCTCCTGCTC GCGCCGTTTC TATGGGTGAG CGGCCCGAAA
AAGCTCTTCA CCCTGGAGCG GCCCGGCCTT CAGCTTGCCC GCGTGGTCGC CTCGACCGCG
GAAGTGATCG CCTTCTATTT CGCCGTCGTC TACCTGCCGC TCGCAGATGT CATGACCTAT
TGGCTGGCTG CGCCGATCTA TGTCGCGGCC ATTTCGCCGC TGGTCCTCAA GGAACCGGTC
GGCTGGCGGC GCTGGACAGC GATCGCCATA GGCTTCGTCG GCGTCGTCGT CGCACTCGAA
CCGTCGTCGC AGGCTTTCAC ACTGCCGGCC GTCATTTCGA TCCTTGGCAG CATGGCCTTC
GCCTTCATGA TGATTTCCGG GCGGTCGCTG CGCGGCACTC CTGATACGAC CCTCGCCTTT
TGGCAGATTG CCGGCGCCGC GGTGGCCGGC CTCGTATGGG CGCCCTTCGA CTGGACACCC
CTCAAGCCGC TCGACACGGC GCTGCTCTGT CTCCTTGGCG TCGTCGCAAT GGTCGCCCAC
GTGCTTGTCA ACCGGGCGCT GAAGCTCGCC GACGCCGCGA CGGTAGCCCC GCTGCAATAC
ACGCTCCTTT TCTGGGCAAT CTTCTTCGGA TGGCTGATCT TCGGCGATAC GCCGCGGCTT
TCGATGGTAC TCGGCGCCGG CCTTATCGTC GCCTCGGGCC TCTTCATCTT TTTCCGCGAA
CAGCAGCTGA AGAGGCAGGG GCGGCTGAAA GGCTGA
|
|---|
| Protein sequence | MDCSARICEW LAENVPAETR SRFEGIEPMA VDSVPGKLSH ENGTARAGVI VMLLGMLMFS
VNDVMGKWLV ATYSVGQVVL IRSIAAVLLL APFLWVSGPK KLFTLERPGL QLARVVASTA
EVIAFYFAVV YLPLADVMTY WLAAPIYVAA ISPLVLKEPV GWRRWTAIAI GFVGVVVALE
PSSQAFTLPA VISILGSMAF AFMMISGRSL RGTPDTTLAF WQIAGAAVAG LVWAPFDWTP
LKPLDTALLC LLGVVAMVAH VLVNRALKLA DAATVAPLQY TLLFWAIFFG WLIFGDTPRL
SMVLGAGLIV ASGLFIFFRE QQLKRQGRLK G
|
|---|
| |