Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4268 |
Symbol | |
ID | 5319019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 757423 |
End bp | 758352 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640776073 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_001313006 |
Protein GI | 150376410 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAT TTTTCGCGGG CACCGCCTTG GCCGTGCTGA TGTCGACGGC AGCGCATGCA GAGACAATCG GGGTGTCGAT GGCGCTCTTC GATGACAACT TTCTGACCGT GCTGCGCAGC GGCATGCAGG ACTATGCCAA AACCCTTGAC GGCGTCGAGC TGCAGGTCGA AGACGCTCAG AACGACGTCT CCAAGCAGCA GAGTCAGATC CAGAATTTCA TTGCCGCCGG TGTCGACGCC ATCATCGTCA ATCCGGTCGA CACAGACGCG ACGACCGTCA TGTCGAAGAT CGCGGCCGAC GCGGGCATTC CGCTCGTCTA CGTCAACCGT GAGCCGGTGA ACGTGGACAC GCTTCCGGAA AAGCAGGCTT TCGTTGCGTC GAATGAACAG GAATCCGGCA CGCTGCAGAC CAAGGAAATC TGTAAGATGC TGGGCGGCAA GGGCAAAGCC GTGGTCATGA TGGGCGAGCT CTCCAACCAG GCCGCGCGCA TGCGCACCAA GGACATTCAC GATGTCGTCG CAACCGACGA ATGCAAGGGC ATCGAGATTG TCGAGGAGCA GACCGCGAAC TGGTCGCGCA CGCAAGGGGC GGATCTCATG ACGAACTGGC TCTCCGCCGG CCTCGAATTC GACGCCGTGA TCTCCAACAA CGACGAGATG GCGATCGGCG CCATTCAGGC GTTGAAGGCG GCCGGACGCT CTATGGACTC CGTCGTGATC GGCGGCATTG ACGCAACGCA GGACGCGCTC GCAGCCATGG CCGCCGGCGA CCTTGACGTG ACGGTTTTCC AGAATGCCGC TGGGCAGGGC AAGGGTTCGG TCGATGCCGC TCTGAAGCTC GCCAAGGGCG AGCCTGTCGA GAAGAAGGTC TACATTCCTT TCGAGCTCGT CACGAAGGAA AACCTGGAGC AGTATCAGGC GAAGAACTGA
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Protein sequence | MKKFFAGTAL AVLMSTAAHA ETIGVSMALF DDNFLTVLRS GMQDYAKTLD GVELQVEDAQ NDVSKQQSQI QNFIAAGVDA IIVNPVDTDA TTVMSKIAAD AGIPLVYVNR EPVNVDTLPE KQAFVASNEQ ESGTLQTKEI CKMLGGKGKA VVMMGELSNQ AARMRTKDIH DVVATDECKG IEIVEEQTAN WSRTQGADLM TNWLSAGLEF DAVISNNDEM AIGAIQALKA AGRSMDSVVI GGIDATQDAL AAMAAGDLDV TVFQNAAGQG KGSVDAALKL AKGEPVEKKV YIPFELVTKE NLEQYQAKN
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