Gene Smed_4224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4224 
Symbol 
ID5319298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp706907 
End bp707893 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content62% 
IMG OID640776029 
Producthypothetical protein 
Protein accessionYP_001312962 
Protein GI150376366 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.190974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT CCGTATCCAT TGCAGCAGTC GTAGCGGCCG CTGTCGGCCT TGCCGCACCG 
GCATCGGCCT TCGAGCCGAA CCGTCCGGTC GAATTCGTCG TCACCGCCGG TCCCGGCGGC
GGCACCGATA TCTTCGCGCG CACCATCCAG GCGATCATCG GCAAATACGA GCTGATGAAG
GCGCCGGTCG TCGTCACCAA CAAGGGCAGC GCCGGCGGTG CGGAAGGCTT CGTCTACACG
GCTGGCCACA AGGGCGATCC CTATAAACTC GCCTTCGGCA CCAACAATGC CTACCTGCTG
CCGGTCCGCG CCAAGGTGCC TTATAAATCC GAGGACCTGA CGCCGGTCGC TTCACTCGCT
TCCGACGAGT TCGTGCTCTG GGTCAACGGC AAGGCGGATT ACGCGACGGC TGCCGATTTC
GTGGCCAAGG CGAAGGAAGG CGGCCTTAAG ATCGGCGGCA GCCAGTCCAA GGACGCCGAC
CAGATCCTGA CCTCGATGAT CAACGACGCA ATCGGCGCCA AGATCAGCTA CATCCCGTTC
AAGAGCGGCG GCGAGGCGGC CGTTCAGCTT GCGGGCGAGC ATCTCGACGC CAATGTCAAC
AATCCGAGCG AGAATCTCGG TCAATGGCAG GCCGGCATGA TCAAGCCGCT TTGCGTCTTC
AAGAGCGCAA AGTTTGCAAG CGACGCCAAG GTAGCCGGCG ACAAGGCCTG GAGCGACATC
CCGACCTGCA AGGAAGCCGG CATTCCGATC GAAAACTACG CGATGCCGCG CACCGTCTGG
CTGCCGGCCG GCGTCGAGCA TGATGTCGTC CAGTTCTATG CGGATGTCCT GCGCAAGGTC
TCCGAGACGC CGGAATGGGA GAAATATCTT GCCGACAGCT CGCAGTCTCC CGGCTTTGTG
ACGGGCGACG AACTCAAAGC CGTCATCGAA AAGGATGGCG CGACGGTCGG CGAAGTGCTG
AAGCGCGAAG GCTGGCTCGC CAACTAA
 
Protein sequence
MKKSVSIAAV VAAAVGLAAP ASAFEPNRPV EFVVTAGPGG GTDIFARTIQ AIIGKYELMK 
APVVVTNKGS AGGAEGFVYT AGHKGDPYKL AFGTNNAYLL PVRAKVPYKS EDLTPVASLA
SDEFVLWVNG KADYATAADF VAKAKEGGLK IGGSQSKDAD QILTSMINDA IGAKISYIPF
KSGGEAAVQL AGEHLDANVN NPSENLGQWQ AGMIKPLCVF KSAKFASDAK VAGDKAWSDI
PTCKEAGIPI ENYAMPRTVW LPAGVEHDVV QFYADVLRKV SETPEWEKYL ADSSQSPGFV
TGDELKAVIE KDGATVGEVL KREGWLAN