Gene Smed_4207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4207 
Symbol 
ID5319102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp689504 
End bp689911 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content61% 
IMG OID640776012 
Product4-carboxymuconolactone decarboxylase 
Protein accessionYP_001312945 
Protein GI150376349 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR02425] 4-carboxymuconolactone decarboxylase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATG CCTTTGCCCA TTCCGCACGT TACCGGCAGG GGATAGCGAC GCGCCGCGCC 
GTTTTAGGCG AGGATCACGT CGAGCGGGCA CAACAGACTT CGACCGATTT CGACCGCCCG
TTCCAGGATT TGATTACCGA GGCAGCTTGG GGGCATGTCT GGTCGCGTCC GGGATGGACA
AAGCGGGAGC GGTCGATTGT CACCATCGCG CTGCTCGCCG CCCTGGGACA GGATGAGGAG
GTGGCCATGC ATGTTCGCGC GACCGCCAAT ACCGGGGCGA CGCGGGAAGA TATTTGCGAG
ACGCTCCTGC ATGTCGCCAT CTATGCGGGG GTTCCAGCCG CCAATCATGC AATCAAGATC
GTCAAGCAGG TGTTCGGCGA AATGGATGCC AGCACGGCTT CTCGATAG
 
Protein sequence
MSDAFAHSAR YRQGIATRRA VLGEDHVERA QQTSTDFDRP FQDLITEAAW GHVWSRPGWT 
KRERSIVTIA LLAALGQDEE VAMHVRATAN TGATREDICE TLLHVAIYAG VPAANHAIKI
VKQVFGEMDA STASR