Gene Smed_4194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4194 
Symbol 
ID5318952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp674323 
End bp677178 
Gene Length2856 bp 
Protein Length951 aa 
Translation table11 
GC content65% 
IMG OID640775999 
Productcell divisionFtsK/SpoIIIE 
Protein accessionYP_001312932 
Protein GI150376336 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1674] DNA segregation ATPase FtsK/SpoIIIE and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.445928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATTC CCCGGACAAA TTTCTCGACT GCAGCTTTGT ATGACGCGAA TCAGGCAGAG 
GATTTCGAGG ATCCACAGCC GGTTGTGCCG GGTATCGTGC ATGCTTCGGC GCCCGAATCG
GCCGCTCACG ACCATCTGTT CGAAGCACCG GAAGCGCCGC GGCGGGCGTC CGGCTACCGG
CAGGAGGAGA TCAGCCAGGC GACGCGTGCC GTGCGCCTCT ACGGTCATGG CTCCGCCTAT
GCCCCGGCCG AGGTGACCGT TTCGACACGG GATCCGCTTC CGACGCTTGC AGAAATCACC
GGCCTTTCCT GCGAACCGGG CTGGGAGAGC CATTTCTTTC TGTCGCCGAA TGTGCGTTTC
ACCCGCACGC CCGAGCGCGA GTTCATGAAG CGCCGGCCGC CGGTACCTGA AGACAACGAG
GTTGACGTCG CCGAAGCAGC GGCCGAAGCC CCACTTGCCG AGACGGTGAC CGGGAAGGAG
CCGGTCGAGC CGCTGCCGTC CCCGGCGGAA ACGGACGCGC CGTCGTACAG CCCGTCCGAA
TTGCTCCGCG TGCTGGTGCA GCAGCTTCCG TCCTTCAACG CCGCGCATCT GCAAACGCCG
GAAAAAAATG CCGTCGAACA AGCGGCCGAA GCTGCCGTCC TGACGGAAGA AGAGCCCTCC
ATTCCGCAGG CGCCGCATGT CCCGATCATG GAAGAGGCTC CGGTGGTTGC GGACGCATCA
ACGGGCACCG CCGCTGTGCC CGACAGCGCC GGAGCGGAAG ACGTTGCGCG CCAGGCGGAG
GCGCGCCTCT CCTACCTTTC CGATTTTGCG TTTTTCGAGT TCATGCCGCT TGAACCGCCG
GTTGCTTTGC GCACTGTCGC GGCACCTGCC GAGGAGTCCG CGCATGTCGC GGCGCCGAGC
TCAGCCCTGC CAAAAGCCGC TGCGCCCAAC ATCGTCTCAG CGCCTGTCAG GATCCCGTCG
CAGCCGCCGG CGGCGATCAC TTCGCTGTTC CGGGTGGTCG AATGCCGGCG GCCCGAGGCC
GGCCCGGACG TGTCCGCGCC CGACGCGCCT CAAGATCTCG GCGCTGAGCC AATCTCTGCT
GGGGCTGCCG TCGGCGCAGA AGCCGTTGAA GCACAGGGTC TGACTCCCGA AGCCCCCGAC
GAGCCTGCAC GGGAGCCGGC GCCCGAAGCT GCCGTCGTGC CCGCAAAGGA ACCGGCGCCC
GAAGCGCCGG TGACCAGGGC GGCAATCACC ATGCCGGCGG TGATCCAGCG TTCGTCGCCG
GCTCTGCCGC CGGTCGGCGC GACCGAACGG CCGGGTATCG CTGACGCCTA CGAGTTTCCG
TCGAAGGAAC TCCTGCAGGA ACCGCCGCAA GGCCAAGGCT TCTTCATGAC GCAGGAACAG
CTTGAGCAGA ATGCCGGCCT GCTCGAAAGC GTTCTCGAAG ATTTCGGCGT CAAAGGCGAG
ATCATCCATG TCCGTCCAGG CCCGGTCGTC ACGCTTTACG AGTTCGAGCC CGCGCCGGGC
GTCAAGTCCT CCCGCGTCAT CGGGCTCGCC GATGACATAG CCCGGTCGAT GTCGGCGCTG
TCCGCCCGCG TCGCGGTCGT GCCCGGCCGC AACGTCATCG GCATCGAGCT TCCGAATGCG
ACGCGCGAAA CCGTCTATTT CCGCGAGCTG ATCGAGTCCG GCGATTTCCA GAAGACCGGT
TGCAAGCTGG CGCTTTGCCT CGGCAAGACG ATCGGCGGAG AACCGGTGAT CGCCGAACTC
GCAAAGATGC CGCATCTGCT CGTCGCCGGC ACCACCGGCT CGGGCAAGTC GGTTGCGATC
AACACCATGA TCCTCTCGCT CCTCTACCGG CTGAAGCCGG AGGAATGCCG GCTGATCATG
GTCGATCCGA AGATGCTCGA ACTCTCCGTC TACGACGGCA TCCCGCACCT GCTGACGCCC
GTTGTCACCG ATCCGAAAAA GGCGGTAATG GCGCTCAAAT GGGCAGTGCG CGAGATGGAG
GACCGGTACC GCAAGATGTC GCGGCTCGGC GTTCGCAACA TCGACGGCTA CAATCAGCGT
GCTGCGGCTG CGCGAGAGAA AGGCGAGCCG ATCCTCGCGA CCGTCCAGAC CGGCTTCGAG
AAGGGCACCG GCGAGCCGCT CTTCGAGCAG CAGGAAATGG ATCTTTCGCC GATGCCCTAT
ATCGTCGTCA TCGTAGATGA GATGGCCGAC CTGATGATGG TCGCGGGCAA GGAGATCGAA
GGGGCGATCC AGCGGCTGGC GCAGATGGCG CGTGCTGCGG GCATCCATCT GATCATGGCG
ACGCAGCGTC CGTCGGTCGA CGTTATCACC GGTACGATCA AGGCTAATTT CCCGACCCGC
ATATCCTTCC AGGTGACCTC CAAGATCGAC AGCCGCACCA TCCTCGGCGA GCAGGGGGCC
GAACAGCTAC TCGGCCAGGG CGACATGCTG CACATGGCCG GCGGCGGCCG CATCGCCCGT
GTTCATGGCC CCTTTGTCTC GGATCAGGAG GTCGAGCACG TCGTCGCGCA TCTGAAGACG
CAGGGACGCC CGGAATATCT CGAAACGGTG ACGGCGGACG AAGAGGAAGA GGAGCCGGAA
GAGGATCAGG GCGCAGTGTT CGACAAGAGC GCGATCGCCG CCGAAGACGG AAACGAGCTC
TACGATCAGG CGGTGAAAGT CGTGCTGCGG GACAAGAAGT GCTCGACCTC CTATATCCAA
CGCCGCCTCG GCATCGGCTA CAATCGCGCC GCCTCGCTGG TCGAACGGAT GGAGAAGGAC
GGTCTTGTCG GTCCGGCGAA CCATGTCGGT AAGCGTGAGA TCATCTACGG CAACCGCGAC
GGCGGTCCGA AGCCGGACAG CGATGAGTTG GACTGA
 
Protein sequence
MRIPRTNFST AALYDANQAE DFEDPQPVVP GIVHASAPES AAHDHLFEAP EAPRRASGYR 
QEEISQATRA VRLYGHGSAY APAEVTVSTR DPLPTLAEIT GLSCEPGWES HFFLSPNVRF
TRTPEREFMK RRPPVPEDNE VDVAEAAAEA PLAETVTGKE PVEPLPSPAE TDAPSYSPSE
LLRVLVQQLP SFNAAHLQTP EKNAVEQAAE AAVLTEEEPS IPQAPHVPIM EEAPVVADAS
TGTAAVPDSA GAEDVARQAE ARLSYLSDFA FFEFMPLEPP VALRTVAAPA EESAHVAAPS
SALPKAAAPN IVSAPVRIPS QPPAAITSLF RVVECRRPEA GPDVSAPDAP QDLGAEPISA
GAAVGAEAVE AQGLTPEAPD EPAREPAPEA AVVPAKEPAP EAPVTRAAIT MPAVIQRSSP
ALPPVGATER PGIADAYEFP SKELLQEPPQ GQGFFMTQEQ LEQNAGLLES VLEDFGVKGE
IIHVRPGPVV TLYEFEPAPG VKSSRVIGLA DDIARSMSAL SARVAVVPGR NVIGIELPNA
TRETVYFREL IESGDFQKTG CKLALCLGKT IGGEPVIAEL AKMPHLLVAG TTGSGKSVAI
NTMILSLLYR LKPEECRLIM VDPKMLELSV YDGIPHLLTP VVTDPKKAVM ALKWAVREME
DRYRKMSRLG VRNIDGYNQR AAAAREKGEP ILATVQTGFE KGTGEPLFEQ QEMDLSPMPY
IVVIVDEMAD LMMVAGKEIE GAIQRLAQMA RAAGIHLIMA TQRPSVDVIT GTIKANFPTR
ISFQVTSKID SRTILGEQGA EQLLGQGDML HMAGGGRIAR VHGPFVSDQE VEHVVAHLKT
QGRPEYLETV TADEEEEEPE EDQGAVFDKS AIAAEDGNEL YDQAVKVVLR DKKCSTSYIQ
RRLGIGYNRA ASLVERMEKD GLVGPANHVG KREIIYGNRD GGPKPDSDEL D