| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4132 |
|---|
| Symbol | |
|---|
| ID | 5319274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 600107 |
|---|
| End bp | 601180 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640775937 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001312870 |
|---|
| Protein GI | 150376274 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.751697 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATC TCCAACTCAG CCAGGTTCGT AAATCCTATG GTGGCCTGGA GGTCATCAAG
GGCGTCGATC TCGACATAAA ATCCGGCGAG TTCGTCGTCT TCGTCGGGCC GTCCGGCTGC
GGCAAGTCGA CCCTTCTGCG GATGATCGCA GGCCTTGAGG AGATCACTTC GGGCGAGCTT
TCGATCGATG AGGTCAGGAT GAACGACGTC GATCCGTCCA AACGCGGTAT CGCCATGGTG
TTCCAGTCCT ATGCGCTCTA TCCGCACATG ACGGTCCGCG AGAATATGGG CTTCGCGCTC
CGCTTCGCCG GCGTCCCCAA GGCCGAAATC GAGAAGCGGG TGAACGAAGC CGCCGATATC
CTCGAACTCG GGACGCTGCT CGACCGCAAG CCTAAGCAGC TTTCCGGCGG CCAGCGCCAG
CGCGTGGCGA TCGGCCGGGC GATCGTCCGC CATCCGAAGA TCTTTCTCTT CGACGAGCCG
CTTTCGAACC TGGATGCGGA ACTGCGCGTG CACATGCGCA TCGAGATCGC GCGACTGCAC
AAGCAGCTCG CCACCACCAT CGTCTACGTG ACGCACGATC AGGTCGAGGC CATGACGCTC
GCCGACAAGA TCGTCGTCAT GCGCGGCGGC GTGGTCGAGC AGATCGGCTC GCCCCTGAAT
CTCTATGATG ATCCGGCCAA CCTCTTCGTC GCCGGCTTCA TTGGCTCGCC AAAGATGAAT
TTCCTGAAGG GAACGACCGA GATCGTCGAA GGCCGGACTT ATGCGCGCCT GCCGGACCAC
GGAGGCTTGA AAATTCCGAT AAGCCTCGAA GCGATAGCCC CGGATACTCC GGTGACGATC
GGCCTTCGGC CCGAGCACTT CAATGAAGCC GGACCGGCTG TGCTCGATCT CACCATCGAC
ATGCTGGAGC ATCTCGGCGG CGAGACCTTT GCCTATGCCC GCCATGGCAA TGGCGCGTTG
ATCGTCGTCG AAACGAAGAA CGGCCGCGGA CTAAAGGCCG GCGACCGCCT CGCTGCCCGT
TTCGATCCGG CCTCGGCGCT GGTGTTCGAT GGAGAGGGAA AACGGCTGCG GTAG
|
|---|
| Protein sequence | MSNLQLSQVR KSYGGLEVIK GVDLDIKSGE FVVFVGPSGC GKSTLLRMIA GLEEITSGEL
SIDEVRMNDV DPSKRGIAMV FQSYALYPHM TVRENMGFAL RFAGVPKAEI EKRVNEAADI
LELGTLLDRK PKQLSGGQRQ RVAIGRAIVR HPKIFLFDEP LSNLDAELRV HMRIEIARLH
KQLATTIVYV THDQVEAMTL ADKIVVMRGG VVEQIGSPLN LYDDPANLFV AGFIGSPKMN
FLKGTTEIVE GRTYARLPDH GGLKIPISLE AIAPDTPVTI GLRPEHFNEA GPAVLDLTID
MLEHLGGETF AYARHGNGAL IVVETKNGRG LKAGDRLAAR FDPASALVFD GEGKRLR
|
|---|
| |