| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4130 |
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| Symbol | groEL |
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| ID | 5319272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 597851 |
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| End bp | 599485 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640775936 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_001312869 |
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| Protein GI | 150376273 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.800331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCA AAGAAATCAT CTTCTCCACC GAAGTCCGCG ATCGCCTGCT TCGCGGCGTG
GAATTGCTCA ACAATGCCGT CAAGGTGACG CTCGGCCCGA AGGGCCGCAA CGTCGTCATC
GACAGGTCGT ATGGCGCACC ACGAATCACC AAGGACGGCG TCTCCGTCGC CAAGGAAATC
GAGCTTGAAG ACAAGTTCGA GAACATGGGC GCGCAGATGG TGCGCGAAGT GGCATCAAAG
ACCAATGATC TTGCCGGCGA CGGCACCACG ACGGCGACTG TGCTTGCCGC GTCCATCTTC
CGCGAAGGCG CCAAGCTGGT CGCGGCGGGC ATGAACCCGA TGGATCTTAA GCGCGGTATC
GACCTCGCCG TTACCGCGGT CCTCGCGGAA ATCAAGCTGC GCGCCACGAA GGTCAATTCG
TCGAGCGAGA TAGCACAGGT CGGCACGATC GCCGCCAATG GCGACGCCAG CGTCGGCGAG
ATGATCGCAG GGGCGATGGA GAAGGTCGGC AACGAGGGTG TCATTACCGT CGAAGAAGCC
AGGACCGCCG ATACCGAACT CGACGTCGTC GAAGGCATGC AGTTCGACCG CGGATATCTA
TCGCCGTACT TCGTGACCAA TGCCGAGAAG ATGCGCGTGG AACTGGACGA TCCCTACATC
CTCATTCACG AGAAGAAGCT CGGCAACCTG CAGACCATGC TGCCGATCCT TGAGGCCGTA
GTGCAGAGCG GCAAGCCTTT GCTCATCATC TCCGAAGACG TGGAAGGCGA AGCGTTGACG
ACGCTCGTCG TCAACAAGTT GCGGGGAGGT CTGAAGATCG CCGCCGTGAA GTCGCCGGGC
TTCGGCGACC GCCGCAAGGC CATGCTGCAG GACATTGCCG TTCTGACCGC CGGCCAGATG
ATTTCCGAAG ATATCGGCAT CAAGCTCGAA AACGTTACGC TCGATATGCT TGGCCGCGCC
AGGCGGGTGC TGATCGAGAA AGACACGACC ACGATCATCG ACGGCTCCGG GGATAAGGCC
TCCATCCAGG CATGCATCAG CCAGATCAAG GCGCAGATCG AAGAGACGAC ATCCGACTAC
GACAAGGAGA AGCTGCAGGA GCGGCTGGCG AAGCTCACCG GCGGCGTCGC GGTAATTCGC
GTCGGCGGCG CGACCGAGCT TGAAGTCAAG GAAAAGAAGG ACCGCATCGA CGATGCCCTG
AACGCCACCC GCGCGGCAGT CGAGGAAGGC ATCGTTGCCG GCGGCGGCGT GGCGTTGTTG
CGTGCGAAAT CGGCGCTTGC CAGTCTCACC GGCGAGAACC CCGAGATTAC CGCAGGCATC
GCGATCGTGC GCAAGGCACT GGAGGCACCA ATCCGGCAGA TCGCCGACAA TGCCGGCGTC
GAAGGCTCGA TCGTCATCGG AAAACTCGTC GACAGCAGCG ACCAGAACCA GGGCTTCGAT
GCGCAGACGG AAACCTATGT GGATATGATC AAGGCCGGGA TCGTCGATCC CGCCAAGGTC
GTGCGGACAG CCTTGCGGGA CGCCGGCTCG ATTGCCGCAC TCCTGATCAC CGCCGAAGCC
ATGGTCGCCG ATATCCCAGA GAAAAACGCC GCTCAAAATG CCGGAAACGG CGCGATGGGC
GGGAGAGGAT ACTGA
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| Protein sequence | MSAKEIIFST EVRDRLLRGV ELLNNAVKVT LGPKGRNVVI DRSYGAPRIT KDGVSVAKEI
ELEDKFENMG AQMVREVASK TNDLAGDGTT TATVLAASIF REGAKLVAAG MNPMDLKRGI
DLAVTAVLAE IKLRATKVNS SSEIAQVGTI AANGDASVGE MIAGAMEKVG NEGVITVEEA
RTADTELDVV EGMQFDRGYL SPYFVTNAEK MRVELDDPYI LIHEKKLGNL QTMLPILEAV
VQSGKPLLII SEDVEGEALT TLVVNKLRGG LKIAAVKSPG FGDRRKAMLQ DIAVLTAGQM
ISEDIGIKLE NVTLDMLGRA RRVLIEKDTT TIIDGSGDKA SIQACISQIK AQIEETTSDY
DKEKLQERLA KLTGGVAVIR VGGATELEVK EKKDRIDDAL NATRAAVEEG IVAGGGVALL
RAKSALASLT GENPEITAGI AIVRKALEAP IRQIADNAGV EGSIVIGKLV DSSDQNQGFD
AQTETYVDMI KAGIVDPAKV VRTALRDAGS IAALLITAEA MVADIPEKNA AQNAGNGAMG
GRGY
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