Gene Smed_4100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4100 
Symbol 
ID5318989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp563000 
End bp563383 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content59% 
IMG OID640775907 
ProductMerR family transcriptional regulator 
Protein accessionYP_001312840 
Protein GI150376244 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.686135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCG GTGAGCTGTC GCGACGGACC GGCGTGAGCA TTCGGATGCT GCGTTACTAC 
GAGGCGGAAG GTCTCCTTGC GCCGCATCGC ACTTCCGCAG GCTACCGGGA ATACGGGCGT
GCCGACGAAC GGACCGTGGA CCGGATCAGA TTGCTTGGAG CCGCTGGAAT GACGCTTGCG
ACCATCAAGC AGTTCCTGCC CTGCGTGCGG GGCGAAGGGC CCGTATTCGA GCCGTGCGAC
GAGCTGCGCG TTACGCTCAA TGAACAGATC AGCCTTGTGG ATCATAAAAT GGAGAGACTT
GCCGCAAGCA GGGACGTCCT GAGCAAGTTC CTTCACGACA TAGAGAAGGC TGATAGGATG
ATCGGCTCTG CAACGCAGTC TTGA
 
Protein sequence
MKIGELSRRT GVSIRMLRYY EAEGLLAPHR TSAGYREYGR ADERTVDRIR LLGAAGMTLA 
TIKQFLPCVR GEGPVFEPCD ELRVTLNEQI SLVDHKMERL AASRDVLSKF LHDIEKADRM
IGSATQS