| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4083 |
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| Symbol | |
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| ID | 5317902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 544377 |
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| End bp | 545402 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640775890 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001312823 |
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| Protein GI | 150376227 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0474473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAGG CAGCGCTGCG CTCGAAAGCT GAAATCGGTC TCATGCTTTA TCCGGGCTGC
CAGATGGCGA TGGTTCACGG CATGACGGAC CTCATCAACA TAGCCCGTCA ATTCTCCGCC
GAGCGGGGCG GGGCGGTGGC ACGGATCAGT CACTGGCGGC TTCGGGACGA CGGCTGTCTT
GCGCGAAGTT TCGACACCCA TCCCGAACTC GGATCACGGG AGATGCCGGA GATACTGCTT
GTCCCCGGCA GGTTGACCGG GCCGATGGAA GCGGAGGAGG CCGCGCCCTA TGCTCGCTGG
CTGCTCGACG GGCATGCCCA AGGCGCGACC CTCGCATCGA CTTGCGGCGG GACCTTCGTG
CTTGCGGCGA CGGGCCTGCT CAAGGGCCGG CCAGCGACGA CGCACTGGCT CTTCGCCAAT
GCTTTCCGTG ACCGGTTTCC GGATGTCCGG CTCGACACGG ACAAGATCGT GATCGAGGAC
GGCGACATCG TAACTGCCGG CGGCCTCATG GCATGGACAG ACCTCGGCAT GCGCCTCGTG
GATCGTCTGT TCGGTCCGAC GGTAACGGTC GAGACCGGGC GTTTCCTTCT TATCGACCCC
GCCGGACGCG AGCAGCGGCA CTATTCCAGC TTTTCGCCGC GCCTCAATCA CGGCGACGAA
GTGATCCTGA AGGTGCAGCA TTGGCTGCAA GCGCGTGAGG CTCGCGCCGT CAGCGTTGCG
CAGATGGCAA AAGTGGTGGC GATGGAGGAG CGTACTTTCC TGCGCCGTTT CAAGGCGGCG
ACCGGAATGA AGCCGATCGA ATATGCCCAG CATCTGCGCG TCGGTAAGGC GCGGGAACTC
CTGGAGTTCA CCAGACGTTC GGTTGAACAG GTCGCCTGGG CAGTCGGCTA CGAGGACGCG
GCCGCCTTTC GCAAGCTGTT CCATAGGATC GTCGGGCTGT CGCGAGGTGA TTACCGGCAT
CGATTCGCGG TAGCGGGCGA GGCCTTTTCG CGCCCCGTCA CCGGCTTGGA ACAAATTGAC
GTTTGA
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| Protein sequence | MPKAALRSKA EIGLMLYPGC QMAMVHGMTD LINIARQFSA ERGGAVARIS HWRLRDDGCL
ARSFDTHPEL GSREMPEILL VPGRLTGPME AEEAAPYARW LLDGHAQGAT LASTCGGTFV
LAATGLLKGR PATTHWLFAN AFRDRFPDVR LDTDKIVIED GDIVTAGGLM AWTDLGMRLV
DRLFGPTVTV ETGRFLLIDP AGREQRHYSS FSPRLNHGDE VILKVQHWLQ AREARAVSVA
QMAKVVAMEE RTFLRRFKAA TGMKPIEYAQ HLRVGKAREL LEFTRRSVEQ VAWAVGYEDA
AAFRKLFHRI VGLSRGDYRH RFAVAGEAFS RPVTGLEQID V
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