Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4067 |
Symbol | |
ID | 5317896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 529696 |
End bp | 531204 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640775874 |
Product | sulphate transporter |
Protein accession | YP_001312807 |
Protein GI | 150376211 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.124032 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGAAGAA AATCAATGAA GCTGACATTT ACGAGTTATA AACGCGAATG GTTCTCCAAC ATCCGCGGTG ACGTCCTTTC AGGCATCGTC GTGGCGCTTG CGCTGATCCC GGAGGCCATC GGCTTTTCTG TCATTGCCGG CGTCGATCCG AAGGTCGGCC TGTTCGCCTC CTTCGCCATT GCATGCGTTT CCGCCTTCAC CGGCGGCCGT CCGGGCATGA TTTCAGCGGC GACCGCCGCC ACCGCCGTGC TGATGGTGAC GCTCGTCAAG GAATACGGCC TCGAATACCT GTTTGCCGCC ACCCTGCTGA TGGGGCTCAT CCAGATAGCC GCGGGCTTTC TGAAGCTCGG GCGGGTCATG CGCTTCGTGT CGCGTTCTGT CATCACCGGA TTCGTCAATG CGCTTGCGAT CATGATTTTC ATGGCGCAGC TTCCCGAACT CATCGGCGTG CCGCACGTAA CCTATGCGAT GATCGGGGCG GGGCTCGCGA TCATCTATCT CTTCCCCTAT GTCACCAAGG CGGTTCCGTC GCCGCTCGTC GCAATCGCCG CCCTGACAGC GATCGCCGTC TGGACCGGCA TGGACATCCG CACCGTAGGC GACCTCGGCG AATTGCCGTC AAGCCTGCCG ATCTTCGCCC TTCCGCAGGT GCCGCTCACC TTCGAGACGC TGCAGATCGT CTTCCCCTAC TCGGTGGGAC TTGCCGCGGT CGGACTGCTC GAGTCCCTTT TGACTGCGCA AATCGTCGAC GACATGACGG ATACGACGAG CAACAAGAGC CAGGAATGCA TCGGCCAGGG CGCAAGCAAC ATCGCATCCG GCCTCATCGG CGGAATGGGC GGCTGTGCGA TGATCGGCCA GTCGGTCATC AACGTGACCT CCGGGGGACG CGGGCGGCTA TCAACCTTCG TGGCCGGTGC CCTCCTTCTC TTTCTCATCC TCGTCCTCGA CGACATCGTG CGCATCATTC CGATGGCGGC ACTGGTGGCG GTGATGATCA TGGTCTCAAT CGGCACCTTC TCCTGGCGTT CGATCCTGGA CCTGCGCCGC AATCCCCTGC CCTCCTCCGT CGTAATGCTG GCAACGGTCG TTACCACCGT CGGAACCCAT GATCTCGCAA AAGGCGTTCT GGTCGGCGTG CTCTTGTCCG GGATATTCTT CGCCGGCAAG GTCGCGCGCC TCTTCCATGT CCGCTCGATA CTTGACCAAA GCGGCCGGGA GCGCACCTAT TACGTCGACG GCCAGATCTT TTTTGCCTCG ACGGAGGGTT TCGTCGGCGC CTTCGATTTC GCCGAACCGC TGGACAAGGT CGTCATCGAC GTGAGCGGGG CGCATCTATG GGACATCACC GCAGTCGGCG CGCTCGACAA GGTGGTGCTG AAATATCGTC GCCACGGCGT GGCGGTGGAG GTGATCGGCC TCAACGAGGC AAGCGCCCAT ATGCTCGACC GCTTCGCCGT GCACGACAAG AGCGAAGAGG CGGGCGCGGC CCTCACTCCA GCCCATTGA
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Protein sequence | MRRKSMKLTF TSYKREWFSN IRGDVLSGIV VALALIPEAI GFSVIAGVDP KVGLFASFAI ACVSAFTGGR PGMISAATAA TAVLMVTLVK EYGLEYLFAA TLLMGLIQIA AGFLKLGRVM RFVSRSVITG FVNALAIMIF MAQLPELIGV PHVTYAMIGA GLAIIYLFPY VTKAVPSPLV AIAALTAIAV WTGMDIRTVG DLGELPSSLP IFALPQVPLT FETLQIVFPY SVGLAAVGLL ESLLTAQIVD DMTDTTSNKS QECIGQGASN IASGLIGGMG GCAMIGQSVI NVTSGGRGRL STFVAGALLL FLILVLDDIV RIIPMAALVA VMIMVSIGTF SWRSILDLRR NPLPSSVVML ATVVTTVGTH DLAKGVLVGV LLSGIFFAGK VARLFHVRSI LDQSGRERTY YVDGQIFFAS TEGFVGAFDF AEPLDKVVID VSGAHLWDIT AVGALDKVVL KYRRHGVAVE VIGLNEASAH MLDRFAVHDK SEEAGAALTP AH
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