| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4040 |
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| Symbol | |
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| ID | 5318340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 501806 |
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| End bp | 503035 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640775848 |
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| Product | FAD linked oxidase domain-containing protein |
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| Protein accession | YP_001312781 |
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| Protein GI | 150376185 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR01679] FAD-linked oxidoreductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.7202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAACA CACCCTGGAG TGCAACCTCA AAAAACCTGG ACCAGGATTG CCACAACTGG
TCGGGCGGTC TGCGCTTTCG TCCAGCGCGT CTGGAGGTGC CGGAGCATGA AGAGGCCGTG
GCAGCGCTCG TGCGCGCGGC CGGCAGGCAG GGCCGAACCA TACGGCCGGT GGGCTCGGCA
CATTCTTCGA GCGAGATTTA CGTCACGGAC GATGTCCTGG TTTCTCTGGC CAATATCTGT
GGTCTGCATG AGCATGACTC TCGATGTCAC CGAGCCGCGG TCGGTGCCGG CTCACAACTG
ACGGAGCTTA GCAAGGAGCT GCAGTCGGCG GGCATGACGC TCTCAAATTT CGGCGACGTC
GCAACCCAGA CCGTCGGGGG CGCGATCGGA ACCGGCACGC ATGGCTCCGG ACGAAACTTC
CCCAACCTTT CGATGATGCT TGTCGGCGGC CGCCTGGTCA CCGCCCGGGG AGAGATCACC
ACCTTCGGCG TCGAAGAGGA CCTGGATTTC GTGCGAGCCT TGCGTGTTTC CTTCGGGACG
CTCGGCATTC TCACCTCAGC CACTCTCCAG CTCGAACCCT TGCACGATCT CCGCCGTCAG
GAATGGTGCC TTGGCTTCGA GCCCTGCATG GAGGCACTCG ATCGGCTTTC CCGGGAAAAT
CGGAACTTCG ACTTCTATTG GTATCCCCGC TCCGATGAGG TGAAGATCCG TTGCCTCAAC
CCGCCGGGCG AGGAAAAGAC TTATGGCGCC TTCGCCCGGC TGGCGAAGGA CGAGACCGGG
CCGCCGCACG AGGTCATTCC GCAGCACAGC GATCTTCCTT ATCGCTTCGA GGAAATGGAA
TATTCCATGC CGGCCGAGGC CGGACCGGAT TGCATGAGAA AGCTGCGCAC GCGCATCAAG
GAAAAATGGC GCCGCTCGGT CGGCTGGCGC GTGCTCTACC GTTACATCAA GCGTGACGAC
ACCTGGCTGA GCGAAGCCTA TGGCCGGGAC TCTGTGAGCA TATCGCTCCA TCAGAACGCG
ACGCTGCCCT ATTGGGACTT CTTTCTCGAC CTCGAACCGG TGATGCGGGA CCATGGCGGC
CGGCCGCACT GGGCGAAAAA GCACAGTCTT CGCGCGACCG AACTCAAGGC CCTCTACCCG
ATGTGGGATC GTTTTCTTGC CCTTCGGCAG GAGCTGGACC CGGAGGGGCG GTTTCTAACG
CCTTATTTGC GCAGACTTCT CGGGTGCTAG
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| Protein sequence | MANTPWSATS KNLDQDCHNW SGGLRFRPAR LEVPEHEEAV AALVRAAGRQ GRTIRPVGSA
HSSSEIYVTD DVLVSLANIC GLHEHDSRCH RAAVGAGSQL TELSKELQSA GMTLSNFGDV
ATQTVGGAIG TGTHGSGRNF PNLSMMLVGG RLVTARGEIT TFGVEEDLDF VRALRVSFGT
LGILTSATLQ LEPLHDLRRQ EWCLGFEPCM EALDRLSREN RNFDFYWYPR SDEVKIRCLN
PPGEEKTYGA FARLAKDETG PPHEVIPQHS DLPYRFEEME YSMPAEAGPD CMRKLRTRIK
EKWRRSVGWR VLYRYIKRDD TWLSEAYGRD SVSISLHQNA TLPYWDFFLD LEPVMRDHGG
RPHWAKKHSL RATELKALYP MWDRFLALRQ ELDPEGRFLT PYLRRLLGC
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