Gene Smed_4032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4032 
Symbol 
ID5318332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp491508 
End bp492212 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content58% 
IMG OID640775840 
ProductGntR family transcriptional regulator 
Protein accessionYP_001312773 
Protein GI150376177 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATATCGG AAGCTCCGAC AGCCAAACAT CGAACCGGCC TTGATCGCAC CCGGCAGATT 
GCACCGCAAA TTGTCGAATA TCTTCGCGAG AAGATCCTCG CGCTGGAACT TGCTCCCGGT
ACGGCGCTCT CACGCGTCGA ACTGCAGAAC CAGTTCGGGC TCAGCCAGAC GCCGGTGCGT
GACGCGCTCA TGCGGCTGGA GGAAGAAGGT CTCGTCACCG TCTATCCGCA ATATGCGACG
CTGGTCTCCA AAATCGACAT CAACCTGGCG CGTCAGACCC ATCTCATGCG GCGCGCCGTC
GAGCAGGAAG CCGTCTTCAA CCTTGCGGAA AACGCAAACA GACGGCAGAT CGCTGATCGC
CTGCGAACCG CGAACACGAA CCTGAAGGCG CTGGCCTCGA AGGAGTTTGC CGATTTTCTC
GCCGCCGACC GTGCATTCCA CTTTATAATA TTCGAAGAAG CCGGGCTGGA GCATATCTGG
CCGATCATCC GCCGCCACAG CGGCCATATC GATCGCCTGC GGCGCCTCAA TCTCGTCAAT
GTCGGCACCA AACGGGTCGT GGATACCCAT GACATGATCA TCGAAGGAAT CGAAAAGGGC
GCGCCCGTGG ACGCGGCTCA AGCGATGAAG ACCCATCTCT CCGGCACATT GTCGATGATC
GACGACATCG CGGCGCGTTA TCCGGATTAT ATAGAACTGG GGTAA
 
Protein sequence
MISEAPTAKH RTGLDRTRQI APQIVEYLRE KILALELAPG TALSRVELQN QFGLSQTPVR 
DALMRLEEEG LVTVYPQYAT LVSKIDINLA RQTHLMRRAV EQEAVFNLAE NANRRQIADR
LRTANTNLKA LASKEFADFL AADRAFHFII FEEAGLEHIW PIIRRHSGHI DRLRRLNLVN
VGTKRVVDTH DMIIEGIEKG APVDAAQAMK THLSGTLSMI DDIAARYPDY IELG