Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4032 |
Symbol | |
ID | 5318332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 491508 |
End bp | 492212 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640775840 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001312773 |
Protein GI | 150376177 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATATCGG AAGCTCCGAC AGCCAAACAT CGAACCGGCC TTGATCGCAC CCGGCAGATT GCACCGCAAA TTGTCGAATA TCTTCGCGAG AAGATCCTCG CGCTGGAACT TGCTCCCGGT ACGGCGCTCT CACGCGTCGA ACTGCAGAAC CAGTTCGGGC TCAGCCAGAC GCCGGTGCGT GACGCGCTCA TGCGGCTGGA GGAAGAAGGT CTCGTCACCG TCTATCCGCA ATATGCGACG CTGGTCTCCA AAATCGACAT CAACCTGGCG CGTCAGACCC ATCTCATGCG GCGCGCCGTC GAGCAGGAAG CCGTCTTCAA CCTTGCGGAA AACGCAAACA GACGGCAGAT CGCTGATCGC CTGCGAACCG CGAACACGAA CCTGAAGGCG CTGGCCTCGA AGGAGTTTGC CGATTTTCTC GCCGCCGACC GTGCATTCCA CTTTATAATA TTCGAAGAAG CCGGGCTGGA GCATATCTGG CCGATCATCC GCCGCCACAG CGGCCATATC GATCGCCTGC GGCGCCTCAA TCTCGTCAAT GTCGGCACCA AACGGGTCGT GGATACCCAT GACATGATCA TCGAAGGAAT CGAAAAGGGC GCGCCCGTGG ACGCGGCTCA AGCGATGAAG ACCCATCTCT CCGGCACATT GTCGATGATC GACGACATCG CGGCGCGTTA TCCGGATTAT ATAGAACTGG GGTAA
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Protein sequence | MISEAPTAKH RTGLDRTRQI APQIVEYLRE KILALELAPG TALSRVELQN QFGLSQTPVR DALMRLEEEG LVTVYPQYAT LVSKIDINLA RQTHLMRRAV EQEAVFNLAE NANRRQIADR LRTANTNLKA LASKEFADFL AADRAFHFII FEEAGLEHIW PIIRRHSGHI DRLRRLNLVN VGTKRVVDTH DMIIEGIEKG APVDAAQAMK THLSGTLSMI DDIAARYPDY IELG
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