Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3993 |
Symbol | |
ID | 5319240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 446560 |
End bp | 447726 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640775801 |
Product | putative adenylate/guanylate cyclase |
Protein accession | YP_001312734 |
Protein GI | 150376138 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.339564 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGAC AAGCGATCTC TAAGCTTATC GAATGGCTCG CCGGCGACGA TTGTCATCGG GCGGATGATG GCGGCCTGGC GGAAGGTCTG GGACAACGCC TGCGCGCTCA CGGGCTGCCG CTCGATCGTC TCACGCTGCA TCTGAGAACT CTGCACCCTG AGATATTCGG CCGCAGTGTG GCTTGGGCGC CCTCGGAACC GGTCGAGGTC CGAGAACGAG AGCACGGCTT CGATCGTACA GCCGGCTTTG CCGGAAACCC GATTAGAAAT GCAATGGAAA CAGGCGAGCC GGTGATGGTC CGTATCGGTG CTTCGAACCG TCCGCTTTGG GTCGACAGCG ACCTGTTCCG GGACCGCGGG CTCGTTGAAT TCTATATCAT GCCGCTTCGC AACGCCGACG GCACAGCAGG CGCCGCCAGC TTCGCGACGA CGCAGCCCTC GGGGTTCACG GATCTGCATC GGGCAGCAAT CGATCGGATT GCGCCGGCTC TGCGCAACGC ATGTGAGCTT CGCACGCTCA GGAGGATCGA GCATACCCTG CTCGATACCT ATATCGGCGC CAGTCCGGCT CGCCGTGTGT TGGCGGGCGG AGTTCGCCGC GGGCAAGTCG AGAAACTTGA AGCCGCACTC ATGCTGTGCG ACCTGCGCGG CTTCACCGAG CTTTCAAATC AGCTTTCAGC CGAGCGGGTA TTGGAACTCC TGAACGGCTA CTTCGATCAG GTCGTACCTG CAATCACACA AGCCGGCGGC GAGGTGATCA AATTCATGGG CGACGCGGCA CTGGCCTTCT TCGACCTGCA GGATCCCGCC ACCTCCTGCA ATGCTGCTCT CGCAAGCGCT TTCGATGCGC TGAAGCGCTT GCAGTGCTGC TCCCCACGCG GAGTTCGGCT CCACGCAGGC ATCGCTCTCC ACTACGGTCA AGCAGCCTAT GGCAACATCG GCGCCAGCCA GCGCCTCGAT TTCACGCTGA TCGGCACCGA CGTCAATCTG GTCAGCCGGA TACAGGGAGT CTGCAGCGCA ACCGGGCACC GGCTGATCCT GTCGGAGCGC TGCGCGCGGC TTCTTCATCC TGATTGCAGC AAATCAATTG GACGCCACAG GCTCAGGGGA TTTCCGGAGC ATGCTACGCT CTACGTTCCA GCCTCTCATC CGGCGTCCAA AAACTAG
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Protein sequence | MSGQAISKLI EWLAGDDCHR ADDGGLAEGL GQRLRAHGLP LDRLTLHLRT LHPEIFGRSV AWAPSEPVEV REREHGFDRT AGFAGNPIRN AMETGEPVMV RIGASNRPLW VDSDLFRDRG LVEFYIMPLR NADGTAGAAS FATTQPSGFT DLHRAAIDRI APALRNACEL RTLRRIEHTL LDTYIGASPA RRVLAGGVRR GQVEKLEAAL MLCDLRGFTE LSNQLSAERV LELLNGYFDQ VVPAITQAGG EVIKFMGDAA LAFFDLQDPA TSCNAALASA FDALKRLQCC SPRGVRLHAG IALHYGQAAY GNIGASQRLD FTLIGTDVNL VSRIQGVCSA TGHRLILSER CARLLHPDCS KSIGRHRLRG FPEHATLYVP ASHPASKN
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