| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3991 |
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| Symbol | |
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| ID | 5317917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 443809 |
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| End bp | 444924 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640775799 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001312732 |
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| Protein GI | 150376136 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.713524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGAA AGATCAAAGG CGTAGCGTCC GCGGCGACCG CGCTCCTGGT GTTTGGAGTG
GGGGCGTATT TTGGACGGGC ATGGTGGCAA GAGTTCCGCA TGCACGAACG GACGGACAAC
GCCTATGTCC GCGCCGACAT CACCGCCATC AGTCCCAAAG TCGCCGGATA CGTATCCACG
GTGCTGGTCG ACGATAACCA GGTCGTCGAA GCCGGCGCCA TTCTTTTGCG AATAGACGAC
GATGACTATC TCGCTCAGCG AGATCGTGCG GCTGCGAGCG TCGCACAGGC CGAAGCAGCC
GTAGGAAATC TGACACGCCG TAAGAGCCTG CAGCTCGCCA ATATCCGCGA GGCCGAAGCG
ATGATCGATG TCGCCCGCGC GGATCTCGAG CTTTCGCGCC GGGAGCTGTC ACGAGCGACG
CGCCTGGTCG ATCAGGGATG GACGGCGCAG CGGAACCACG ATACGGCGAC GGCGAAAGCA
CAGAGTGCTC GCGCCACGCT CGTTCGCGCC GAAGCGGCGG CAGCGGCTGC CCGGGCGCAG
CTGGCAGTGC TTGATTCGGA ATCTCCGCAG ATCTCGGCGC GCCTCGCCGA GGCGCGCGCA
AACCTCCGAC TCGCGGAAAT TGCCCTTTCT GAAACGGTCA TCAGAGCGCC GGTGTCCGGA
GTTGTCGGGA ACCGAAAAGT GCGCGAGGGC GAATATGTCC GGCCCGGCAG CGTTCTTCTG
TCCGTGGTTC CCCTTGACGG CATCTGGGTC GTCGCCAATC TCAAGGAGAC ACAGCTTGCC
CGCGTCATGC CTGGCCAACG TGCCGAAATC CGCGTGGACG GTTATTCGAC GACGGTGATC
GAAGGACGCG TAGACAGCCT GGCACCCGCA AGCGGCGCCG CCTTCAGTCT TTTACCACCG
GACAATGCGA CCGGGAATTT CATCAAGGTC GTTCAGCGCG TGCCCGTCAA GATCCGGCTT
GAGCCCGATC ACGCTTTTCA GGGCCGGCTC GTCCCGGGTC TGTCGGTGGA CGTCGCCATA
CACCTGGCTC CCGAGCCCGA GCGGCCACCC TCCCAAAGCA ATCCGGTCGC CGCTGGCCGC
CCGACTTCAT CCCTAACTGC CAGGAGAGAG CCATGA
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| Protein sequence | MKRKIKGVAS AATALLVFGV GAYFGRAWWQ EFRMHERTDN AYVRADITAI SPKVAGYVST
VLVDDNQVVE AGAILLRIDD DDYLAQRDRA AASVAQAEAA VGNLTRRKSL QLANIREAEA
MIDVARADLE LSRRELSRAT RLVDQGWTAQ RNHDTATAKA QSARATLVRA EAAAAAARAQ
LAVLDSESPQ ISARLAEARA NLRLAEIALS ETVIRAPVSG VVGNRKVREG EYVRPGSVLL
SVVPLDGIWV VANLKETQLA RVMPGQRAEI RVDGYSTTVI EGRVDSLAPA SGAAFSLLPP
DNATGNFIKV VQRVPVKIRL EPDHAFQGRL VPGLSVDVAI HLAPEPERPP SQSNPVAAGR
PTSSLTARRE P
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