Gene Smed_3982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3982 
Symbol 
ID5318115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp432757 
End bp433863 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content66% 
IMG OID640775790 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_001312723 
Protein GI150376127 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACGA TTCATCAGCC GCGTCGGCTT GTCGTCGGCG CGGGGAACAT CAGTCAGGTC 
GGCACGTGGG CCGCTGAGGT GGCCTCGACG CTCGTCATCG CGACGCCGAT CACATCGGGC
TTCGCCGAGC GCCTGCAGCT TCCTGGCAAG CTAACCCTCT TCGATGCAAT TCCGGGGGAA
CCCGATATCG CGACGCTCGA CGCGGCGCTG GACGCCGCCC GGAAGGCCCG CCCGGACTTG
ATCGTCGGTC TTGGCGGCGG CTCGGTGATG GATGTCGCCA AGCTGGTGGC GGTGCTCTGG
GATTCGGGAC AGTCGCTTGC GGATGTCGCC GGGCCAAATC GCGTGGCTGG CCGCAATGTG
CGCCTGGCGC AGGTCGCGAC GACGGCGGGC ACCGGCTCGG AAGCGGGAAT CCGCTCACTG
ATCACCGATC CCGGCAAGGG CAGCAAGATC GCGGTCGAAA GCCCGCACAT GATCGCCGAT
CTTGCCGTAC TCGATCCGGA GCTCACATAC AGCGTGCCGC CTGCCGTCAC CGCCGCGACC
GGGGTGGATG CCATGGCGCA TTGCGTCGAG GCCTTCACCA ACCGCAAGTC CCATCCGATG
ATCGACGGCT TTGCCCGCAT GGGGTTCAAC CTCGTCGGCA AATATCTCGC CCGTGCCGTG
CGGGACGGAG AAGATACCGA GGCGCGCGAG GGCATGATGC TCGCTTCCTA TTATGGCGGC
ATCTGCCTTG GCCCCGTCAA CACGGCGGCG GGGCACGCGA TATCCTATCC GCTCGGCACG
CTCCTGCACC TGCCGCACGG CCTCGCCAAT GCCATCATCT TTCCGCATGT GCTTGCCTTC
AACCAGCCGG TCGTCTCCGC AAAAACGGCC GAGGTCGCCG ATGCGCTTGG CCTCGGGCAG
GGCCTGTCGC AGCGTGATCT GCTCTCGGCC GCAAGGGACT TCTGCGCCGG TCTCGGCATA
GAGATGTCTC TGGCCGCCAA TGGCGCCAAG GGCGCGGATC TGCCCCGCTT TGCCGCCGAT
GCCCATTCGA TCCGCCGGCT CATGGACAAC AATCCCGCAG ACATGAGCGA GGCGGACGTT
CTGGAGATCT ATCGGGCGGC ATTTTAG
 
Protein sequence
MITIHQPRRL VVGAGNISQV GTWAAEVAST LVIATPITSG FAERLQLPGK LTLFDAIPGE 
PDIATLDAAL DAARKARPDL IVGLGGGSVM DVAKLVAVLW DSGQSLADVA GPNRVAGRNV
RLAQVATTAG TGSEAGIRSL ITDPGKGSKI AVESPHMIAD LAVLDPELTY SVPPAVTAAT
GVDAMAHCVE AFTNRKSHPM IDGFARMGFN LVGKYLARAV RDGEDTEARE GMMLASYYGG
ICLGPVNTAA GHAISYPLGT LLHLPHGLAN AIIFPHVLAF NQPVVSAKTA EVADALGLGQ
GLSQRDLLSA ARDFCAGLGI EMSLAANGAK GADLPRFAAD AHSIRRLMDN NPADMSEADV
LEIYRAAF