| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3970 |
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| Symbol | |
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| ID | 5319068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 420931 |
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| End bp | 422538 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640775779 |
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| Product | protein of unknown function DUF894 DitE |
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| Protein accession | YP_001312712 |
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| Protein GI | 150376116 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGG CGGGTCTCGA GGGCACGGGC ACATTCGCTC CGTTGCGGCA GCAGGTCTTT
GCCGTCCTTT GGGTGGCAAC GATCATAGGC AATACGGGCA GCTTCATCCG CGACGTCGCC
AGTTCCTGGC TCGTGACCGA ACTTTCGGCG ACGCCCGCCG CGGTTTCGCT CGTACAGGCC
GCGGCGACGC TTCCCGTTTT CCTGCTCGCC ATCCCGGCCG GAGTGCTTTC GGATATCCTC
GACCGGCGAA AGTTCCTGAT CGCCGTTCAA TTGCTTCTCG CTTCCGCCAG TCTTTGCCTT
CTCACGCTCT CCGCCATGGG GCTTCAGTCC GTCAGCTCGC TCGTTGCGCT TACTTTCATT
GGGGGCATCG GAGCCGCTCT CGTCGCACCA ACATGGCAGG CGATCGTGCC TGAACTCGTG
CAGAGGCAGG ACGTCAAAGG AGCGGTGGCG CTCAACTCGC TGGGCATCAA TATTTCGCGC
GCGATCGGCC CGGCGCTCGG CGGTCTGCTG CTGGCCTGGT TCGGCGCTGC GGTCACCTAC
GGGGTGGATG TCATCACTTA TGTCTTCGTC GTCGCTGCAC TGCTCTGGTG GCGGCGCGGG
ACGCCTGAGG ACGATGCGCT TGCCGAGCGC TTCTTCGGCG CGTTCAGGGC GGGTCTGCGC
TATGCCCGGT CGAGCAGGGA ACTGCACGTC GTCCTCATCC GCGCGGCCGT ATTCTTTGCT
TTTTCGAGCG CCATCTGGGC ATTGCTGCCG CTCGTCGCGC GCCAGCTTCT CGGTGGAGAC
GCCAGCTTCT ATGGCATGCT GCTTGGCGCC GTCGGCGCAG GCGCGGTCTG CGGCGCTCTG
GTCATGCCGC GCCTGCGCGC CAGGCTGGAT GCCGATGGCC TGCTGCTCGC AGCCGCAATC
GTCACCGCCG CTGTCATGGG CGTACTTTCG CTCGCTCCGC CGCAATGGGC GGCCGTCGCG
GCCTTGCTGG CCTGCGGCGC TGCCTGGATC ACGGCGCTGA CGACGTTGAA CAGCACAGCG
CAGTCCATCC TCCCCAATTG GGTGCGGGGA CGCTCGCTTG CCGTCTATCT GACCGTCTTC
AACGGTGCGA TGACCGGGGG AAGCCTTGCC TGGGGCGCGA TCGCCGAAGC AGTTGGCGTC
CCGTCGGCCC TCGGCATCGC CGCGATCGGC CTTCTCTGTG TCGGGCTCGG CTTTCATAGG
GTAAAGCTCC CCAGAGGCGA GGCCGAGCTT GTGCCCTCCA ATCACTGGCC GGAACCGCTG
ACGGCTCAGC CGGTTGAGAA CGACCGCGGC CCCGTGCTCA TCCTGATCGA ATACATCGTC
GACAGGAAGG ACCGGCCCGC CTTTCTGAAA GCGCTTGCAA GCCTCTCGCA CGAGCGCCGC
CGCGATGGGG CCTACGGCTG GGGCGTGACC GAGGATGCCG CCGATCCGAG CCGCGTCGTC
GAATGGTTCA CGGTGGAGTC CTGGGCCGAA CACATGCGGC AGCACAGGCG CGTGTCGAAG
GCGGACGCCG ATGTTCAGCA GGAAGTCCGC GCCTATCATC AGGGGTTGGA GCCTCCCGCC
GTACAGCATC TTTTGGCAAT CAACCGCCCG CATATCAAGG GCAAGTGA
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| Protein sequence | MKAAGLEGTG TFAPLRQQVF AVLWVATIIG NTGSFIRDVA SSWLVTELSA TPAAVSLVQA
AATLPVFLLA IPAGVLSDIL DRRKFLIAVQ LLLASASLCL LTLSAMGLQS VSSLVALTFI
GGIGAALVAP TWQAIVPELV QRQDVKGAVA LNSLGINISR AIGPALGGLL LAWFGAAVTY
GVDVITYVFV VAALLWWRRG TPEDDALAER FFGAFRAGLR YARSSRELHV VLIRAAVFFA
FSSAIWALLP LVARQLLGGD ASFYGMLLGA VGAGAVCGAL VMPRLRARLD ADGLLLAAAI
VTAAVMGVLS LAPPQWAAVA ALLACGAAWI TALTTLNSTA QSILPNWVRG RSLAVYLTVF
NGAMTGGSLA WGAIAEAVGV PSALGIAAIG LLCVGLGFHR VKLPRGEAEL VPSNHWPEPL
TAQPVENDRG PVLILIEYIV DRKDRPAFLK ALASLSHERR RDGAYGWGVT EDAADPSRVV
EWFTVESWAE HMRQHRRVSK ADADVQQEVR AYHQGLEPPA VQHLLAINRP HIKGK
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