| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3963 |
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| Symbol | |
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| ID | 5318197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 411388 |
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| End bp | 413238 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640775772 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001312705 |
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| Protein GI | 150376109 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0013556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCTTC TAAGTGAATC GGCGAAGGCG GTAGCGGCCG CAAACGGGCC TGCCGCGCCA
ACGGCCTGGC AGGCCTGGCG CTATCGGCTG AAGGTTGCGT TACGGGAACC CACGACACTC
ATAGGCGTGC TGACTGCACT GCTGTTCACC TATCTGATCG TCGTACCGAT CATTTCCATC
GTGCTCGATG CGGCCCGGGT CCAGTTCGGG CACGAGCGGC GCCTGAGCAA GGATGTCGGC
GAGTTCACGC TCTACTACCT CGACAGGGTG CTGTTTTCTC CGGTGTCGGC AGACCTGTTC
TGGCGCCCGC TTCTCAATAC GCTCTCGGTG GCGATGGGCG CCATTTTGCT GTCCCTCGTG
ATCGGCACCG TGCTCGCCTG GCTCATCAGC CGGACGGATA TGTTCGGGCG CCGCTGGTTC
GCGACCGCGC TGATCGTACC CTACATGTTG CCGGCCTGGA CCTTTGCGCT CGCCTGGACC
ACGCTCTTCA AGAACCGCAC GGTCGGCGGT CAGCCGGGTT GGCTGGAGGC GGTTGGGCTG
ACACCGCCCG ACTGGCTCGC TTATGGGCGA TTTCCAATCA CCATCATCCT GGCGCTGCAC
TACACACCCT TTGTCATCCT CCTTTTCGGT TCGGCGCTCA GGCGCTTCGA CTCGCAGCTC
GAGGATTCGG CGCGCATCCT CGGCGCCAGG CATCACCAGG TGGCCTTGCA GATCATCCTG
CCCTTGATGC GTCCGGCATT GCTTTCATCG ATGGTGCTCA TCTTCGCCAA GTGCCTGGGC
GAGTTCGGCG TGCCCTACGT GCTCGGCCTG CCGGTCAAAT TCGAAGTTCT CTCGACTTCG
CTTTTCCGCA GTATCGCCTC GCGCCAGACG GGGGTCGCCG GAGTGATCGC CGGCTCCATC
ATGCTGATCG GCATCATCAC GCTGCTGATC GATGCACGGC TGGTGCGCGA GGCGCGTCGC
TTCGTCACGA TCGGCTCGAA GGGCTCGATG GACCGGCAGA GCCGCCTCGG CCGCATGCGT
CTGCCGGCGG CGGGCTTCGC TGCCACGGTC TTCCTGATGA GTGTGGGCTT GCCGCTTCTC
ACCCTGTTCC TGTCGACGAT CATGAAGCTG CCCGCGCGAT TCACGCTCGA CAACTTCACC
CTTGATTATT GGATTGGTCG TGATCTCGAT ACCGTTGCGC TGAAGACCGG CATCCTCCTT
AGTCCCGACC TTTGGGCAGC TGCAAAGAAC ACGCTGACGA TCGTGGGGCT CGCTTCGGTG
ACGTCGGGCA TTCTCGGCCT GCTGGTCGGC TATGTGGTCA TTCGCACGCC TGTTCGCCTG
CTGTCGGTCT ATCTCCGGCA GGTGACCTTC CTGCCCTATC TGGTGCCTGG CATAGCCTTT
GCCGCGGCCT ATCTGTCACT GTTCGCAGTA CCCCGCGGAC CGATGCCGGC ACTCTATGGC
ACGGTCGTCA TCCTCGTGCT CGCGCTCATC GCAGACCAGA TGCCCTACGC CTCGCGCGCC
GGCATCTCTG CGATGACTCA GCTCGGAAAG GACCCGGAGG AGGCGGCCCA GATTGCCGGT
GCCGGCTGGC TCAGACGGAT GACTTCGATC GTCATTCCGA TCCAGAAGGG CTCGCTCGTC
ACCGGCGTGC TGCTGCCGTT CATCTCCGGG ATCAAGGGCC TTAGCCTCTT CGTCATCCTC
GCCGTGCCGA GCACGGATGT GCTGACCACC TATTCATTGC GCCTCGTCGA CTACCACTAC
ACGCAGGCCG CTAACGCCGT GGTGCTCATC ATTGCCGCCA TCGCTTATCT GGGCACGCTC
ATCGCCCAGA AGCTGACCCG CACAAATCTT GCAGAAGGAC TTGGAAGCTG A
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| Protein sequence | MALLSESAKA VAAANGPAAP TAWQAWRYRL KVALREPTTL IGVLTALLFT YLIVVPIISI
VLDAARVQFG HERRLSKDVG EFTLYYLDRV LFSPVSADLF WRPLLNTLSV AMGAILLSLV
IGTVLAWLIS RTDMFGRRWF ATALIVPYML PAWTFALAWT TLFKNRTVGG QPGWLEAVGL
TPPDWLAYGR FPITIILALH YTPFVILLFG SALRRFDSQL EDSARILGAR HHQVALQIIL
PLMRPALLSS MVLIFAKCLG EFGVPYVLGL PVKFEVLSTS LFRSIASRQT GVAGVIAGSI
MLIGIITLLI DARLVREARR FVTIGSKGSM DRQSRLGRMR LPAAGFAATV FLMSVGLPLL
TLFLSTIMKL PARFTLDNFT LDYWIGRDLD TVALKTGILL SPDLWAAAKN TLTIVGLASV
TSGILGLLVG YVVIRTPVRL LSVYLRQVTF LPYLVPGIAF AAAYLSLFAV PRGPMPALYG
TVVILVLALI ADQMPYASRA GISAMTQLGK DPEEAAQIAG AGWLRRMTSI VIPIQKGSLV
TGVLLPFISG IKGLSLFVIL AVPSTDVLTT YSLRLVDYHY TQAANAVVLI IAAIAYLGTL
IAQKLTRTNL AEGLGS
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