| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3952 |
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| Symbol | |
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| ID | 5318060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 400959 |
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| End bp | 403202 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640775762 |
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| Product | histidine kinase |
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| Protein accession | YP_001312695 |
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| Protein GI | 150376099 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGATC CGAACGAGGC CTATGAGATC CAGATTGCCA AGCAGGCCAA GATCATCGAA
GCCCTCGTCA ACCGGGCAGA GCGCGGGCAC GAAGTCGGCG GCACTGCCTA TTCTCTCTTT
GAATCCGCTA TCGCGCTCCA GGCGGAGGTC TGGGAGAAGA CCAAGGATCT CGAAAAGGCG
CTCGATACGC TGGACCGGGC TTCGAGTGAG CTCGAGGTGG CCTACCAGAC GCAGGAGCGC
ATACAGAGGA ATCTCGCCGA TGCCATGGTG GCGATGGAGG ACGGCTTCGC TCTCTTCTCC
GAAGAGCGGC TGCAGGCCTG CAATGCCCAG TTCCGGCAAT TGCTGCCCGA TGTCGAGCCG
CTGATCAAGC CAGGTCTTGG CTTCGACGAC TACCTGGCAG CAGTCAATGC GAGCAAGTAT
CTGAACCGCG ACGAAAACGG AGTGTCCGGG CGGCCGCACC CGGTCGCGAA GGAGCAGGGG
TCAGGGCAGC GCTTCTCATC CTTCGTCATG GTTCTGCGGA ACGACCGCTG GTTCCAGATT
TCCTATCGGC AGACCAGTTC CGGCAACATC ACGGTCCTGC AGACCGAAAT CACGGACATC
GTACGGGAGA ACCGGCGCGA GAAGAACCGT CTGATCGACC AGCAGTCTCA TCTCCTGCAG
GCGGCCTTCG ACCATATGTC CCTCGGCATC TGCACGTTTT CCTCGAGAGG CGAACTGCTG
GTTCGGAACG AGCGCTTCGG TGAGCTTCTC GGCGTACCGC TCTCGCTTCT AAAGAAGCGA
AGTCCTTTCC AGCGCATTGT CGAACACGTC GAGCGCCACG AAATTCTCGA TCGCGAGGGG
CGTCGCTCCA GGGTATCCGG CTGGTTCAAG GCGGTGCGCC GTGGCGAGGC CGTTCAGGAG
CGCTTCCGCC GGCGCGACGG GATGGGCCTC GATATCCGCA TCCATTCCCT GCCCGACGAC
GGCTTCATCG TTTCTATAAT GGACGTAACG GCAGAGACCG AAGCTTCCGC ACTTCTGGAG
CAACGCGTAC AGGAGCGTAC CGCCGAACTG ACCGAGGCCA ATCGCCTGCT GCAAATCCAC
GCCGACGAAC AGACAAAAAT CGAGGCCGCC CTTCGACACG CCAAGGAAGC TGCGGAAGCA
GCCCACACAT CCAAGACGCG TTTTCTGGCG GCGGCCAGTC ACGACCTCCT TCAGCCGATC
AATGCGGCTA AGCTTTATCT GTCGATGCTG ACCGACAGGA TGGGGCAGCC GGGTGTCGAG
GAGGTCGTCA GCCGTTTGAA GCGTTCCTTC ACATCCATCG AATCGCTTCT GCAGGCGCTT
CTCGACATTT CCCGTCTGGA CAGTTCGGGC GCCGAGTTCA ACGTCACTTC GTTCAATCTC
GGAAGCCTGC TGCAGGGTGT GGCCGAGGAT CTGGCGCCCC TGGCGACGGA AAGGGCGATC
GAGCTTCGAA TCGTGCCGTC GACGCGCTGG GTCAGCAGCG ACCAGCGCTA CCTGATGCGT
TGCGTTCAGA ACCTGGTCGT CAACGCCATC CAATATACGG AGCGCGGGCG TGTGCTGGTC
GGTTGCCGGC TGAAAGGCGA TGCCGTGCGA ATAGAAGTGT GGGATACGGG TGTCGGAATA
TCAGAGGAGG ACCGGGCGCG GATATTCAAG GAATTCACCC GAGCCAGTGG CGCTGCGAAA
GGTCCGGGCA TGGGACTTGG CCTGTCGATC GTCGAGCGGG CATGCCGGCA CCTCGGTCAC
CCCATAGGCC TGGCATCGCA GCCCGGCCGA GGTTCCGTCT TCTCGATCGA AGTGCCGCTG
GCGCCGCCGG GCCGTGCCAG CGTGAGCGAG GAGCCGAGAA TGGAGCCGAT GCTTGAGGGC
AGTCTCGACC TGATCGTCAT GATCGTCGAG AACGACGCCG ACGAGCTACA CGCAATGACG
CAGGTTCTGG AGAGCTGGGG AGCAAGCGTT CTGGCGGCCG GCTCGACTGC CGATGCGGCA
GCGCTGATGC AGGAAATCGG CACGGCGCCC GACATTCTGC TCGTCGACTA TCAGTTGAAC
GATGACGATA ACGGCATAGA GACCATCCGC ACGCTGCGGG CGCTCGCTGG AGCGGAAATC
CCCGCTATCA TCATTTCCGC CAACCGGCAG CGGCAATTCC TGCAGCTCTG TACCGAAATG
TCCTTCGCCG TGCTCACCAA GCCTGTGCAA CTGGTGCGGC TCAGAGCGTT GATCGACTGG
AAGACCCGGG CCCGCGTGGC GTGA
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| Protein sequence | MIDPNEAYEI QIAKQAKIIE ALVNRAERGH EVGGTAYSLF ESAIALQAEV WEKTKDLEKA
LDTLDRASSE LEVAYQTQER IQRNLADAMV AMEDGFALFS EERLQACNAQ FRQLLPDVEP
LIKPGLGFDD YLAAVNASKY LNRDENGVSG RPHPVAKEQG SGQRFSSFVM VLRNDRWFQI
SYRQTSSGNI TVLQTEITDI VRENRREKNR LIDQQSHLLQ AAFDHMSLGI CTFSSRGELL
VRNERFGELL GVPLSLLKKR SPFQRIVEHV ERHEILDREG RRSRVSGWFK AVRRGEAVQE
RFRRRDGMGL DIRIHSLPDD GFIVSIMDVT AETEASALLE QRVQERTAEL TEANRLLQIH
ADEQTKIEAA LRHAKEAAEA AHTSKTRFLA AASHDLLQPI NAAKLYLSML TDRMGQPGVE
EVVSRLKRSF TSIESLLQAL LDISRLDSSG AEFNVTSFNL GSLLQGVAED LAPLATERAI
ELRIVPSTRW VSSDQRYLMR CVQNLVVNAI QYTERGRVLV GCRLKGDAVR IEVWDTGVGI
SEEDRARIFK EFTRASGAAK GPGMGLGLSI VERACRHLGH PIGLASQPGR GSVFSIEVPL
APPGRASVSE EPRMEPMLEG SLDLIVMIVE NDADELHAMT QVLESWGASV LAAGSTADAA
ALMQEIGTAP DILLVDYQLN DDDNGIETIR TLRALAGAEI PAIIISANRQ RQFLQLCTEM
SFAVLTKPVQ LVRLRALIDW KTRARVA
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