Gene Smed_3939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3939 
Symbol 
ID5318520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp389937 
End bp390446 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content62% 
IMG OID640775749 
Producthypothetical protein 
Protein accessionYP_001312682 
Protein GI150376086 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCACA TCCTGGTAGC TTTGATCCTG ACAATGTGGC CTGCTCTGGC TTGTGCAGCG 
CTGGACAAGC CGCTGGAGCC CGGTGCCAAG GTGGCGTTCC TCGGCATGAC CTTCATCGAT
CTGTCGACGG AGGGCACGTA TAACGGGGTG CGGGCTGACG AGACCGCGCG GCTCGAACTC
ATGGAAAGCG CCGCGCGTGA CCGCTTCGTT CAGGAAGGTT TCGTCATGCT CTCGACGGCG
CCCGTGGCCG CCGAACTCGC CAGCACGGTA AACCCGGCCG ACTGCAACGG TTGCGAGCTG
CACATGGGCG AGCGGCTCGG CGCCGATTAT GTGCTCGTCG GCGAGGTGCG GAAGATCTCC
AACCTTATCC TGTCGGTGGA ACTCGTTCTG CGCGACGTGA ACTCCGGCGA GATCCTGCGC
GGCATTGCGG TAGACATCCG GTCGAACACC GACGACAGCT GGCTGCGCGG CATTCGCTAC
ATTTTGAAGA ACCATTTCTT CAAATCATGA
 
Protein sequence
MRHILVALIL TMWPALACAA LDKPLEPGAK VAFLGMTFID LSTEGTYNGV RADETARLEL 
MESAARDRFV QEGFVMLSTA PVAAELASTV NPADCNGCEL HMGERLGADY VLVGEVRKIS
NLILSVELVL RDVNSGEILR GIAVDIRSNT DDSWLRGIRY ILKNHFFKS