Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3937 |
Symbol | |
ID | 5318518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 387522 |
End bp | 388526 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640775747 |
Product | YVTN beta-propeller repeat-containing protein |
Protein accession | YP_001312680 |
Protein GI | 150376084 |
COG category | [S] Function unknown |
COG ID | [COG3391] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.328417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAAAT CCGCAATGGC GCTTTTGCCC GCCGTTCTGA TGCCCGCCGT TCTGATGCCC GCCGTTCTGA TGTTTGCCGG TTCTGCCGAG GCCAACAAGG TCTTCGTGAG CAACGAACGG GGCAACAACG TCACCGTGCT CGACAGCCAA AGCTGGAAAG TGATCGCCAC GTTTCCGGCA GGCAACAGGC CGCGCGGCAT CACCATCAGC CCGGATGGCA AGGAGCTTTA CGTATGCGCC TCGGACGACG ACACTGTTCG CGTCTTCGAT CCCGAGACCT ATAAGGAACT GCACACGCTG CCCTCTGGCC CGGACCCGGA GCTCTTCGCT CTCGCGCCGT CAGGCAATCC GCTCTACATC GCCAATGAGG ACGACAATCT GGTAACCGTC GTGGACGTCA AGACCCGCCA GGTGCTGGCC GAGGTGCCTG TCGGCGTCGA ACCGGAGGGC GTAGCGGTCA GCCCGGATGC AAAGACGATC ATCAACACGT CCGAAACCAC CAATATGGCG CACTTCATCG ACGCCGCGAC CTACAAGATC GTGCACAACG TGCTCGTGGA CCAGCGGCCG CGCTATGCGG AATTCACTGC CGACGGCAAG AAGCTTTACG TGAGTTCGGA AATCGGCGGC ACCGTTTCCG TGATCGACGT GTCGGCGGCC GAGCCGAAGA TTACCAGGAA GATCACATTT GAAGTGCCCG GCGTCCTGCC GGAATGGCTG CAGCCGGTCG GTGTCAAGGC GACCAAGGAC GGCTCACGTA TTTTCGTGGC GCTAGGGCCC GCGAACCGCG TCGCGGTGAT CGATGGGGAG ACCGACGAGG TGCTCGACTA TCTGCTTGTA GGGCAGCGGG TGTGGCAGAT GGCATTCACG CCGGGCGAGG AATTCCTGAT CACCACCAAC GGCAATTCCA ACGACGTCAG TATCATCGAC GTGAAGGCGG AAAAGGTTAT CCAGTCGGTT CAGGTGGGCG AGCAGCCTTG GGGTGTGGTG GTTGCACCGA ATTGA
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Protein sequence | MLKSAMALLP AVLMPAVLMP AVLMFAGSAE ANKVFVSNER GNNVTVLDSQ SWKVIATFPA GNRPRGITIS PDGKELYVCA SDDDTVRVFD PETYKELHTL PSGPDPELFA LAPSGNPLYI ANEDDNLVTV VDVKTRQVLA EVPVGVEPEG VAVSPDAKTI INTSETTNMA HFIDAATYKI VHNVLVDQRP RYAEFTADGK KLYVSSEIGG TVSVIDVSAA EPKITRKITF EVPGVLPEWL QPVGVKATKD GSRIFVALGP ANRVAVIDGE TDEVLDYLLV GQRVWQMAFT PGEEFLITTN GNSNDVSIID VKAEKVIQSV QVGEQPWGVV VAPN
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