Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3926 |
Symbol | |
ID | 5318762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 378652 |
End bp | 379587 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640775736 |
Product | CbxX/CfqX monofunctional |
Protein accession | YP_001312669 |
Protein GI | 150376073 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0464] ATPases of the AAA+ class |
TIGRFAM ID | [TIGR02880] probable Rubsico expression protein CbbX |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATGC CGGATGCTCC AACAACTACC GAAAGCCTGC CGACTTCGGT CGACCTCGCT GAGGAATACC AAGCCTCCGG CGTCGCCGAG ATCCTCGACG AACTGGACCG GGAACTCGTA GGATTGAAAC CCGTCAAGCA GCGCATCCGC GAGACGGCTG CCCTGCTTCT GGTCGAGCGG GCTCGCCGGG CAATGGGCCT CAGCCATGAG CCGCCATCGC TGCATATGAG CTTCACGGGC AATCCCGGAA CCGGCAAGAC CACCGTGGCG CTGCGCATGG CCAACCTGCT GCACAGGCTC GGCTACATCC GCAAGGGCCA TCTGGTTTCG GTGACCCGGG ATGATCTGGT CGGCCAGTAT ATCGGCCACA CCGCACCCAA GACCAAGGAG ATCCTCAAGA AGGCGATGGG GGGCGTGCTG TTCATCGACG AGGCCTATTA CCTCTACCGC CCGGACAATG AACGCGACTA CGGGCAGGAA GCGATCGAGA TCCTTCTGCA GGTCATGGAG AACAATCGCG ACGACCTGGT CGTCATTCTT GCCGGCTACG CCGATCGCAT GGATCGGTTC TTCGAGAGCA ATCCGGGTTT CCGCTCGCGC ATCGCGCACC ACATCGATTT CCCCGACTAT GATAACGGCG AACTGCTTTC CATCGCCGAA AGCATGCTCA GCCGTCAGGG ATATCGTTTC GATGCCAAGG CGTCGGCGGT GATGGGCGAT TACATCGAAC GCCGCCGGTG CCAGCCGCAT TTCGCCAATG CGCGCTCCAT CCGCAACGCG CTCGACCGCG CCCGGCTGCG ACAGGCAAAC CGCCTCTTCG AGGAAAGCGC CGGACCCGTC GACGCCGAGC AACTTTCGAC CATCACCGCT CGGGACATTT CGGCAAGCCG CGTGTTCGCC GCCGGGGAGC CCAGCCATAA GGAGACAACG CCATGA
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Protein sequence | MLMPDAPTTT ESLPTSVDLA EEYQASGVAE ILDELDRELV GLKPVKQRIR ETAALLLVER ARRAMGLSHE PPSLHMSFTG NPGTGKTTVA LRMANLLHRL GYIRKGHLVS VTRDDLVGQY IGHTAPKTKE ILKKAMGGVL FIDEAYYLYR PDNERDYGQE AIEILLQVME NNRDDLVVIL AGYADRMDRF FESNPGFRSR IAHHIDFPDY DNGELLSIAE SMLSRQGYRF DAKASAVMGD YIERRRCQPH FANARSIRNA LDRARLRQAN RLFEESAGPV DAEQLSTITA RDISASRVFA AGEPSHKETT P
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