| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3915 |
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| Symbol | |
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| ID | 5318700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 366981 |
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| End bp | 368108 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640775725 |
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| Product | pyrroloquinoline quinone biosynthesis protein PqqE |
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| Protein accession | YP_001312658 |
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| Protein GI | 150376062 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR02109] coenzyme PQQ biosynthesis protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA CAATCGCCCG CCCAGCCGAC GCCGTTGTCG CGGCACCACG CGTGCCTCCG
CCGATGGCCA TGCTGGCGGA ACTGACCCAT CGTTGTCCGC TCGCCTGCCC CTATTGCTCC
AATCCCATCG CACTGACGCA AGCCAAGGAA GAATTGTCGA CCGACGAATG GGTAGACGTC
TTCGCGCAAG CCGCCGATCT CGGGGTCCTG CATCTGCATT TGTCCGGCGG GGAGCCGGCA
TCGCGCAGAG ATCTCGTGGA CTTGACGCAG GCGGCGGGGT CGCTTGGTCT TTACACCAAT
CTGATCACCT CTGGCGTGGG ATTGACAGAG GCAAGGATGA ACAGCCTCGC CGAGGCGGGG
CTCGACCACA TCCAGCTTTC CATTCAGGGG GTCTCGCCCG AAAGCGCCGA TCGGATCGGT
GGGTACCGGG GCGGTTATGA ACGGAAGATG GCTGTTGCCG GCTGGGCAAC GAATGCTGCT
ATTCCGCTGA CGTTGAACGC CGTCTGTCAC AGGCAGAACA TGGGCGAAAT CGACGAAATC
ATCGAGCTTG CGTTTCTGCT GAAGGCGCGG CGGGTCGAGA TCGCGACCGT ACAGTTCCAC
GGCTGGGCCG AGCGGAACAA GGAACTCCTC ATGCCGACGC GTGAGCAGGT CGAACGCGCC
ACCCGAACCG TCGCCGAAGC GCGCGAAGCC TATCAGGGCA TTCTGGTGAT CGACTATGTG
CCGGCCGATT ATTATTCCAA GTATCCGAAA GCCTGCATGG GCGGATGGGG AAGGGTGGGC
CTGAACATCA CGCCATCCGG GCGGGTGCTG CCATGCCATG CCGCGGAAAC CATTCCGAGC
CTCTCCTTCG AAAACGTGCG CGACAGCGCC CTTTCGAAGA TCTGGTACGA TAGCGACGCA
TTCAACGCCT ATCGGGGCGA GGACTGGATG CCGGAGCTCT GTCGGAACTG CGACCGCAAG
AAGGTGGATT TCGGCGGCTG TCGCTGTCAG GCGATGACGC TTGCCGGCGA TGCCAGTGCG
ACAGACCCGG TTTGCATCCG ATCGCCGCTT CGTGATCGCC TGACGCGGGA AGTCGAGCAG
CTCGCGGCTC CATCGACCAC CACCACAAAT TATCGTGGTC GGGCGTAG
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| Protein sequence | MSDTIARPAD AVVAAPRVPP PMAMLAELTH RCPLACPYCS NPIALTQAKE ELSTDEWVDV
FAQAADLGVL HLHLSGGEPA SRRDLVDLTQ AAGSLGLYTN LITSGVGLTE ARMNSLAEAG
LDHIQLSIQG VSPESADRIG GYRGGYERKM AVAGWATNAA IPLTLNAVCH RQNMGEIDEI
IELAFLLKAR RVEIATVQFH GWAERNKELL MPTREQVERA TRTVAEAREA YQGILVIDYV
PADYYSKYPK ACMGGWGRVG LNITPSGRVL PCHAAETIPS LSFENVRDSA LSKIWYDSDA
FNAYRGEDWM PELCRNCDRK KVDFGGCRCQ AMTLAGDASA TDPVCIRSPL RDRLTREVEQ
LAAPSTTTTN YRGRA
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