Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3904 |
Symbol | |
ID | 5318217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 357970 |
End bp | 358473 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640775714 |
Product | hypothetical protein |
Protein accession | YP_001312647 |
Protein GI | 150376051 |
COG category | [S] Function unknown |
COG ID | [COG3652] Predicted outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0471754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACAG TCAACATCAC CCTTGCAGCA ATTATGCTGT GCTTCGTCTC GATTCAGGCG GTCAGCGCTC AGACAAAGCC AACGGAGCCT CAGGAGTTCG CGCGGAAAAT GTCGATGTCG AACCTTTTCG AGCTGAAATC GGCGGAACTG GCGCGGCAGC GGGGCGAGGG ACGCCAGGTG CTGGAGTTCG CCGAGCGGAT GCTCGCTGAT CATGCGCGTG CCGGCAAGGA ACTGGCCGAA GCAGCACGGA AGGACGGCGT GGAGCTTTCC CAGTCGCTCG ACAAGGCCGG GCAGGAGAGG CTTGCTGCCT TGCAGGCGCT AAACGGCGCG ACCTTCGATC CGGCTTATCT GTCGTCGCAG GTTACTGCGC ATGAGGATGC GCTGGAACTT CTCAAGACCT ATGCTGAGCG AGGCGAGGCC GGGGCCCTGA AAACGTTTGC CGAATCCGCA TATCCGACCG TCAGAACGCA TTTGCTCCAG GTTCAGTCGA TTACATCTCC GTAA
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Protein sequence | MRTVNITLAA IMLCFVSIQA VSAQTKPTEP QEFARKMSMS NLFELKSAEL ARQRGEGRQV LEFAERMLAD HARAGKELAE AARKDGVELS QSLDKAGQER LAALQALNGA TFDPAYLSSQ VTAHEDALEL LKTYAERGEA GALKTFAESA YPTVRTHLLQ VQSITSP
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