Gene Smed_3882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3882 
Symbol 
ID5318562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp338563 
End bp339159 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content65% 
IMG OID640775694 
Productphosphoglycerate mutase 
Protein accessionYP_001312627 
Protein GI150376031 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACGA CTTTCCTTCT GGTGCGGCAT GCCGCCCATG ATAACGTCGG CTGCTACCTC 
GCCGGTCGGA CCGGCGACGT GCCGCTCGGT GCCGCCGGGA GGGAGCAGGC CCAGCGGCTT
TCGGCGCGCC TTTCCGGCCA AGGCATAAGG GCGATTTACG CGAGCCCGCG CAAGCGCACG
CAGCAAACGG CCGAGGCGAT CGCCGCCGTA TCCGACGTCT CGGAGGTCCT GACGACAGAG
GCGCTCGACG AGGTGGATTT CGGAGAATGG TCTGGCAAGA CCTTCGACGT TCTCGACGAG
GATCCGCATT GGCGACGTTG GAACGCCGTG CGAAGCCTCG TTCGCGCGCC CGGCGGGGAG
ACGATGCTCG ACGTGCAAAG CAGGGCAGTG GGACTTGTCG CTGCCCTGGC ACAGCGGCAC
GGGCAGGAGA AGATCGTCCT CGTGAGCCAC GCGGACGTCA TCAAGACCGT GGTTTGTCAT
GTCCTCGGCC TCTCGGCTGA CGCCTGGCCG CGCTTCGACA TTGCGCCGGC CTCGATTTCG
GTAGTCGCGA TGGGCGACTG GGGCGCAAAA ATCCTGACGC TGAACGAATA CGTGTAG
 
Protein sequence
MTTTFLLVRH AAHDNVGCYL AGRTGDVPLG AAGREQAQRL SARLSGQGIR AIYASPRKRT 
QQTAEAIAAV SDVSEVLTTE ALDEVDFGEW SGKTFDVLDE DPHWRRWNAV RSLVRAPGGE
TMLDVQSRAV GLVAALAQRH GQEKIVLVSH ADVIKTVVCH VLGLSADAWP RFDIAPASIS
VVAMGDWGAK ILTLNEYV