Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3824 |
Symbol | |
ID | 5318016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 278944 |
End bp | 279585 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640775636 |
Product | dihydroxyacetone kinase, L subunit |
Protein accession | YP_001312569 |
Protein GI | 150375973 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2376] Dihydroxyacetone kinase |
TIGRFAM ID | [TIGR02365] dihydroxyacetone kinase, phosphoprotein-dependent, L subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.234592 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACGT TTGAAAATGC AAAAGCCGGC GATATCGTCC AGGCCCTCGC CGAACGGATC ATCGAAAACC GTGCTTATCT GAGTGAGATC GACGGCAAGA TCGGTGACGG CGATCACGGC GTAAACATGG CCAAGGGCTT CGGCCTTGCC GCGGAACGAC TGAAGGACAA GGACGCCTCG CTTGCAGAGG CGCTCGAAAC GCTCGGCACC GTGCTGATGA CGGAGATCGG CGGCTCGATG GGCCCGCTCT ACGGCGTGAT GTTCACCGAG TTCGCCGAGA AGATCGAGGC GGTCGACGCG ATCGATGCGA CCGCCTATAG CCGCATGCTT CACGCCGGAC TGGAAGGCAT CCAATCCATC GGCTCCGCGA AAGTCGGCGA CAAGACACTG CTCGACAGTT TCGTGCCGGC CGTCGAAGCT TTCGACGCGG CGATCGCCGC CGGCAGGTCT TTCGCCGAAG CGCTCGAAGC GCTCACAGCG GCAGCGGAAG CCGGGCGTGA TTCGACCCGC GATCTGGTTG CAAAGATAGG CAGGGCGAGC CGCCTGGGCG AACGCTCCCT CGGCGTGCTC GACGCGGGCG CGACCTCCTG TGCGATTATC CTGAGGGAGT TGTCGGGAGG GGCCCGCGCC CGGCTCCGCT GA
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Protein sequence | MQTFENAKAG DIVQALAERI IENRAYLSEI DGKIGDGDHG VNMAKGFGLA AERLKDKDAS LAEALETLGT VLMTEIGGSM GPLYGVMFTE FAEKIEAVDA IDATAYSRML HAGLEGIQSI GSAKVGDKTL LDSFVPAVEA FDAAIAAGRS FAEALEALTA AAEAGRDSTR DLVAKIGRAS RLGERSLGVL DAGATSCAII LRELSGGARA RLR
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