Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3753 |
Symbol | |
ID | 5318743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 196915 |
End bp | 199143 |
Gene Length | 2229 bp |
Protein Length | 742 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640775566 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001312499 |
Protein GI | 150375903 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.151959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACGC ACAATCGTAG ACTGGATATC GTGCTGGCTC TCGGGCTCGC AGCCTTCACC ATCTTTCCCT GGTACAGGAT CGACGGCGGA TTCTTCGGAT TCGGTTGGCT ATCCGGCTTC CCCGTCGAAC CGGCGGTCGC GCCGGGTTTC CTTCAGATTG CCGCCTTTGG CAAATGGTGG CTGGTGCTTC CGGCTCTTGC CGTTCTCGCC GCCCTCTCCG TTCGTTTCAT TGGCGATGCG GCGCGACGAG GAAGCCTCCT CGCCTGGGCG GGCGCCGCCG GTATCGTGAT CATGGCTCTT CAGGGCCTCG CCATCGGTTT ATCCGGCTGG AACTGGACGA TCAGCGAGGC GATGTTGGGC ACGCTTGCGG ACGGTCAGCC CCCGATGGGC GCCGGAGCCG TGCTTGCCGC GCTCGTCTTC GTCTTTATTT TCGCCTTCGG ACTCGCCGAG CGGGGCGTGA TGAAGGGCGA CGCCTTCGCG GTTGCGTCCA TCTCGCTGCT TGTCTTTCTC GTCGCCGTCT TCGTCTTCTA CCCTGTCGGC AGCATGCTGG TCGGCGCCTT CCAGGATTTT GACGGGTCCT TCAACCCCGA GGGCTTCAGC CGCAATATAG TCGACCCGTC GATCTGGAGC CTTGACTGCG TGATCGGCGG CCGGCGCTGC GGCATTGCCT GGCGGACGTT CTGGCTGGCG GTGATGACCG CCGGCGGCTC GACCATCCTC GGGCTCGCCT TCGCGCTGCT CGCGACCCGC ACGGCATTCC CCTACAAGCG GAGCCTCAGG CTTCTCACGG TGCTGCCGAT CATCACGCCC CCCTTCGTGG TCGGTCTAGC GCTCACGCTG CTCTTCGGCC GCTCCGGCGT CATCACCGAA GCCATGTCGA CGCTGATCGG GGTCGAGCCC GGCCGCTGGC TCTATGGGCT GACCGGCATC TGGATTGCAC AGGTTCTGTC CTTCACCCCC ATCTCCTTCC TGGTGCTGAT CGGCGTCGTC GAGGGCGTCA GCCCCTCGAT GGAAGAAGCC TCGCAAACGT TGAGGGCGAA CCGCTGGCGG ACCTTCTGGC GCATTTCGCT GCCGCTGATG AAACCGGGGC TGGCCAATGC ATTCCTCATC GGCTTCATCG AAAGCATGGC CGATTTCGGC AACCCGCTTG TCCTTGGCGG CAGCCACGGC GTGCTTTCGA CGGAGATCTT CTTCGCTGTC GTGGGCTCGC AGAACGATCC CTCCCGTGCC GCGGTGCTCG CCATCATCCT CCTGTGTTTC ACGCTCACGG CCTTCCTGGC ACAGCGCTTC TGGCTTTCGG GAAAGAGCTA CGCCACGGTC ACCGGCAAGG GCGACAGCGG CGCTCACGCT GCCCTGCCTC GCACGGTTTC GATCGCGGTG CATGTCCTGG TCATCCCGTG GGCGCTCTTC ACCCTCGTCG TTTACGGCAT GATTCTCGTC GGCGGCTTCG TCAAGACCTG GGGGCTGGAC AACTCGCTTA CGCTCGCACA TTACGCCAAG GCATTCTCCG TCGAGCTTCG CGACGGCGGC ATCGCCTGGA CGGGGGTTGC CTGGAATTCC TTTTGGACGA CCATGGAGAT CGCCCTGATT TCGGCCCCGC TGACGGCAGC CGTCGGCCTT CTTACCGCCT ATCTGATCGT GCGTCAGAAG TTTGCCGGAA GGGAACTGTT CGAATTCGCC CTGATGATGA GCTTCGCCAT TCCCGGGACC GTCATCGGCA TCAGTTATAT AATGGCTTTC AACCTGCCGC CCCTTGAAAT GACCGGCAGC GCGCTGATCC TTGTCGCCTG CTTCGTCTTC CGCAACATGC CGGTCGGCGT CCGCGGCGGG GTGGCTGCGA TGAGCCAGCT CGACCGAAGC CTCGACGAGG CGTCGCTGAC GCTCAGGGCC GATAGCTTCC GCACCATCCG CAAGGTCATA CTGCCGCTGC TGCGGCCGGC GATCACGGCA GCCCTCGTCT ACTCGTTCGT GCGCGCGATC ACTTCGATAA GCGCGGTGAT TTTCCTGGTC AGCGCCGAGT ACAACATGGC GACGGCTTAC ATCGTCGGGC TGGTCGAGAA CGGCGAATAC GGTGTGGCGA TCGCCTATTC CTCCATGCTG ATCGTAGTGA TGATTGCGGT CATTGCCGGC TTCCAGCTTA TCGTCGGCGA ACGGAGGCTT CGGCGCGAAA ACCGGATCCA GGCCGTTGCC GGCGTACCCG TTCCTCTTCC CCAGGAGAAA ACCGCATGA
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Protein sequence | MKTHNRRLDI VLALGLAAFT IFPWYRIDGG FFGFGWLSGF PVEPAVAPGF LQIAAFGKWW LVLPALAVLA ALSVRFIGDA ARRGSLLAWA GAAGIVIMAL QGLAIGLSGW NWTISEAMLG TLADGQPPMG AGAVLAALVF VFIFAFGLAE RGVMKGDAFA VASISLLVFL VAVFVFYPVG SMLVGAFQDF DGSFNPEGFS RNIVDPSIWS LDCVIGGRRC GIAWRTFWLA VMTAGGSTIL GLAFALLATR TAFPYKRSLR LLTVLPIITP PFVVGLALTL LFGRSGVITE AMSTLIGVEP GRWLYGLTGI WIAQVLSFTP ISFLVLIGVV EGVSPSMEEA SQTLRANRWR TFWRISLPLM KPGLANAFLI GFIESMADFG NPLVLGGSHG VLSTEIFFAV VGSQNDPSRA AVLAIILLCF TLTAFLAQRF WLSGKSYATV TGKGDSGAHA ALPRTVSIAV HVLVIPWALF TLVVYGMILV GGFVKTWGLD NSLTLAHYAK AFSVELRDGG IAWTGVAWNS FWTTMEIALI SAPLTAAVGL LTAYLIVRQK FAGRELFEFA LMMSFAIPGT VIGISYIMAF NLPPLEMTGS ALILVACFVF RNMPVGVRGG VAAMSQLDRS LDEASLTLRA DSFRTIRKVI LPLLRPAITA ALVYSFVRAI TSISAVIFLV SAEYNMATAY IVGLVENGEY GVAIAYSSML IVVMIAVIAG FQLIVGERRL RRENRIQAVA GVPVPLPQEK TA
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