Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3742 |
Symbol | |
ID | 5318732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 186060 |
End bp | 186869 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640775555 |
Product | GntR domain-containing protein |
Protein accession | YP_001312488 |
Protein GI | 150375892 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGTGCT TACTGGTATT ACCAGTTGGA ACCATTTGCA TGAACCCTGT GCTTTCAGAC AGTGCCGACG AACTTGCGGG AACCGAAAAG GTGCTCTCAT TCTTCCGGGA ACAGCTTCTG TCCGGTGCCC TCAAAGTGGG CGACAGGCTG TTGGGCGAGC GGGAGCTCTG CCTGGCTCTG GGCGTGTCGA GGCCGGTGCT GCGGGAGGCT CTGCGATCGC TCGCCAATCT GGGCTTTCTC GACATCCGTC ACGGTAAGGG CGCCTTCGTG CGCAAGGCCG ACGTGGGTGT ATTCGGCGAT TTTCTGACAT TTTGCCTGGC TCAGCAGCCC GACATGCTCG ACGACATCAT GCAGGCTCGT GTCGCGATCG AATGCCAGGC CATTCGCCTT GCCTGCATCC GGGCCACGGA CAGCGATCTC TCACGTATCG GCAGTCTGCT GACACGTCTG ATGGAGACGC TCCACGACGC GGAAGACGGT GGTGCCGCGG ACTTCGCCTT TCACATGGCG ATCGTCGAGG CCAGCCGCAG TCCAGCGCTC ACCACGGTTT ACCGCTCGAT ATCCGACCTT CTGAAGCGCA GCCATGTCCA GCGGCGCGCC GAGACGAGCG ATGCGCCCGG AATCACCGAT TATCTCGTGG AAGCCCATCG GGAGGTCTTC CTGTCCATTC TCGCGCGTGA TCCGGACAAG GCCGACAGGA TGCTGCGCGA ACATTTCGCC ATCGGCGACG AGCTTCGGCG CAAAAGCTAC ATAGCTGCCT TCACCAGGAA GGATGCGCCG CAGGAAGAGG AAAAAGAAGC AGACAGCTAA
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Protein sequence | MWCLLVLPVG TICMNPVLSD SADELAGTEK VLSFFREQLL SGALKVGDRL LGERELCLAL GVSRPVLREA LRSLANLGFL DIRHGKGAFV RKADVGVFGD FLTFCLAQQP DMLDDIMQAR VAIECQAIRL ACIRATDSDL SRIGSLLTRL METLHDAEDG GAADFAFHMA IVEASRSPAL TTVYRSISDL LKRSHVQRRA ETSDAPGITD YLVEAHREVF LSILARDPDK ADRMLREHFA IGDELRRKSY IAAFTRKDAP QEEEKEADS
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