| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3713 |
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| Symbol | |
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| ID | 5318526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 155064 |
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| End bp | 156074 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640775526 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001312459 |
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| Protein GI | 150375863 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.252604 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCGCC TTTCTGGTCT TTTGACGTGT GTTTCGCAGT GCATACAGAA CCTAAGAAGA
GGGAACATGA CAATGCTGAA ACAGATCACT GCAATGACCA CCGGACTGCT CATGACGATC
GGCGTCGCCA ATGCCGCTGA GCCGGAGAGC TGCAAGACCG TCCGCTTCTC CGATGTCGGC
TGGACCGACA TCACGTCTAC GACGGCTGTC GCCTCGACCA TTCTCGAAGC GCTCGGCTAT
GCGCCGGAAA GCAAGCTGCT ATCGATCCCC GTCACCTATG CGAGCATGAA GAACAAGGAC
ATCGACGTCT ATCTCGGCGA TTGGCAGCCG AGCATGGAAG CCGACCGCAA GTCTTTCCTA
GAGGACAAGT CGATCGAAGT GATCGGCCCG AACCTCACCG GCGCCAAATA TACATTCGCC
GTGCCGAAAT ACGTCGCGGA CGCAGGCGTC AAGGACATTT CCGATCTCCA GAAGTTCGCC
GACAAGTTCG GCCGGAAGAT CTACGGGATC GAACCCGGCA ACAACGGCAA CCGCATGATC
CTCGACATGA TCAATAAGGG TGACTTCGGG CTGACCGGCT GGGAGCTCGT CGAGTCATCC
GAGCAGGGCA TGCTTGCCGA GGTCGAAAGA GCAACAAAGG ACGAGCAGTG GATCGTCTTT
CTCGGATGGG CTCCGCATCC GATGAATACG CGCTACCGGA TCGATTATCT CTCGGGCGCG
GACGCCTATT TCGGCCCGAA TTACGGGGGC GCCGATATCT ATACCAACAT TCGGGCCGGC
TATGCGCAGG AATGTCCGAA TGTCGCGAGA TTTGTGACGA ATCTTCGCTT CACCCTGGAC
ATGGAAAACG AGATCATGAA CGGGATATTG AACGACGGAA AGGACCCGAA GGAAGCCGCA
GCCGATTGGT TGAAGGCTCA TCCGGATGCA GTCGCTCCGT GGCTTGAAGG TGTGACGACA
TACGATGGCG GGCCGGCAGC GGGCGCGGTC GAGATGGCGC TGAAAAGCTA G
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| Protein sequence | MSRLSGLLTC VSQCIQNLRR GNMTMLKQIT AMTTGLLMTI GVANAAEPES CKTVRFSDVG
WTDITSTTAV ASTILEALGY APESKLLSIP VTYASMKNKD IDVYLGDWQP SMEADRKSFL
EDKSIEVIGP NLTGAKYTFA VPKYVADAGV KDISDLQKFA DKFGRKIYGI EPGNNGNRMI
LDMINKGDFG LTGWELVESS EQGMLAEVER ATKDEQWIVF LGWAPHPMNT RYRIDYLSGA
DAYFGPNYGG ADIYTNIRAG YAQECPNVAR FVTNLRFTLD MENEIMNGIL NDGKDPKEAA
ADWLKAHPDA VAPWLEGVTT YDGGPAAGAV EMALKS
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