| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3663 |
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| Symbol | |
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| ID | 5318677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 100349 |
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| End bp | 102109 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640775476 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_001312409 |
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| Protein GI | 150375813 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0156041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCA TCGACCCCAT CACCCTGACC GTTATCCAAT CCGGCCTCCA GCAGGTCTGC
GACGAGATGG ACATGACCTT CTCGCGAGCT GCATTCTCGC CGATCATCGC CGAGGCGGAC
GACCGCTCCG ACGGCATCTA TTCCGCCGAG GATGGTTCGC TGATCGCCCA AGGCATCAAG
GGGCTGCCGG TCTTCGTCGG AACGATGCAG GCATCGACCC GCACTCTTAT CGAGTTCATT
CGCGACGGCC GCTGCCTGCC GCCGGAGGAG GATGACATCT ATGCGGTGAA CGACCCCTAT
CTTGGCGGCA CGCACCTGAT GGACGTCCGC TTTGCCACGC CGTTCTATCG TAACGGGGAG
ATTTTCTGCT GGCTCTCGAA CATCGGACAC TGGCCCGATA TCGGCGGCGC CGTGCCCGGC
GGGTTTTCGG CATCCGCCAC CTCCGTGGAG CAGGAAGGAC TTCGTTTCCC GCCGATCAAG
CTGTTCAAGC GCGGCGTTCT CGATCGCGAG CTTTTCTCGA TCATCAGCTC CAACATCCGC
GTCGCAGAGC AGCGCATAGG CGATATCCGG GCTCAGGCGG CCGCCTTGCG GGTCGGCAAG
GAGCAGTTCA CGGCCCTGCT CGACCGCTAT GGTGACGACA CGGTAGCGGC GGCCATTGCA
GAATTGAGGC GCCGCTCGGC AGCGCAGATG CGCGCCTCCA TCCGCACCAT CGCGCCCGGA
ACCTATCACG GCAAAGCCTT CATCGATTCC GATGGAGTGG TCAACGAACC GCTCACCATT
GCCCTGTCTG TGACCAAGAC CGGCGACGAC CGGCTGGTCT TCGATTTCGC GGGGTCCAGT
CCGCCCTGCC GCGGCCCGAT GAATTGCGTG CTGGCGACGA CCCACTCCTC GGTCTATCTC
GCCATGCGGC ACATCTTTCC GGAGATCCCG CTCAGCGCCG GCGCTTTCGA GCCGCTGGAG
ATCGTCAGCC CTGCTGGCAC GTTTCTTGAT GCGCAATATC CACGGCCGGT CTCAGGCTGT
GCGGCGGAAG TGTCGCAGCG CATCGCCGAG GCGGTCTTTT CCGCCCTCGT ACAGGCACTG
CCGGAGCGCG TGACCGCGGC TCCCGCCGGT TCCAGCGGCA ATTTCGCACT CGGCGGCAGC
GATCCGCTGC TTGGCCGCGA CTACGTGATG TACCACATTT CCGGTGGCGG TTACGGCGGC
AACGCCCGGG AAGACGGCCT GACCAACGGC TGCTCCACCA TCGGCATATC CAAGTCCGCC
CCGGTCGAGA TCACCGAGCA GGTTTTTCCG GTGTTCTTCC GCGAATACGC GATCCACGAG
GGCTCCGGCG GTGCGGGACG CAACCGGGGC GGCTTCGGCC TCAGCTACGA AGTGGAATTG
CTGCGCGGCG ACGCCCAGGC ATCCTTCGTG ATGGATCACG GCGCCTTCGG ACCCCAGGGG
GCCCTCGGCG GCGCGGATGG CGCAGTGGGC ACGATCACGG TCACGCGAGG TGGAAAAACC
TATCGGCCGG AACATCTGTC GAAGGAACAG GACATAGCAC TGACCGCCGG GGACCGGGTC
CGGGTGGAGA CCCCCGGTGG CGGCGGATAC GGCCTGGCCC ACGAACGGGA CGTCGAGGCC
GTGCTCAAGG ACGTGTTCCT CGGCTATTAC TCGCTGCAGC AGGCAGAAAG CCTCTTCGGC
GTCGTGATCG ATACGACAAG CGGCAAGCTT GACAGGGAAG CGACCGAAAA GTTGCGCCGC
CGCCGCTCGA AAGGCGCCTG A
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| Protein sequence | MSTIDPITLT VIQSGLQQVC DEMDMTFSRA AFSPIIAEAD DRSDGIYSAE DGSLIAQGIK
GLPVFVGTMQ ASTRTLIEFI RDGRCLPPEE DDIYAVNDPY LGGTHLMDVR FATPFYRNGE
IFCWLSNIGH WPDIGGAVPG GFSASATSVE QEGLRFPPIK LFKRGVLDRE LFSIISSNIR
VAEQRIGDIR AQAAALRVGK EQFTALLDRY GDDTVAAAIA ELRRRSAAQM RASIRTIAPG
TYHGKAFIDS DGVVNEPLTI ALSVTKTGDD RLVFDFAGSS PPCRGPMNCV LATTHSSVYL
AMRHIFPEIP LSAGAFEPLE IVSPAGTFLD AQYPRPVSGC AAEVSQRIAE AVFSALVQAL
PERVTAAPAG SSGNFALGGS DPLLGRDYVM YHISGGGYGG NAREDGLTNG CSTIGISKSA
PVEITEQVFP VFFREYAIHE GSGGAGRNRG GFGLSYEVEL LRGDAQASFV MDHGAFGPQG
ALGGADGAVG TITVTRGGKT YRPEHLSKEQ DIALTAGDRV RVETPGGGGY GLAHERDVEA
VLKDVFLGYY SLQQAESLFG VVIDTTSGKL DREATEKLRR RRSKGA
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