Gene Smed_3650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3650 
Symbol 
ID5318397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp87250 
End bp88071 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content64% 
IMG OID640775463 
Productrhodanese domain-containing protein 
Protein accessionYP_001312396 
Protein GI150375800 
COG category[P] Inorganic ion transport and metabolism
[S] Function unknown 
COG ID[COG0607] Rhodanese-related sulfurtransferase
[COG4275] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.867375 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCAC ATCTCGAAAT CGCTCCCGAG AAACTTGCCC GCCTCATCGG CACGCCGAAA 
TGCCCCGCGC TTATCGACGT CCGTGTGGGC GAGGATTTCG ACGAGGATCC GCGCCTAGTC
CCGGGCTCGA TCCGTCGCGA CTACCGCAAG GTCCAGGAAT GGGCCACTGA ACTCGGCGGA
ACTTCGGCGG TCGTCGTTTG CCATCGTGGC AAGAAGCTGA GCTACGGCGT TGCCGCATGG
CTTCGCAATT ATGGCATTGC CGCCGACGTC CTCGAAGGGG GGGTCGCGGC CTGGACCGAA
GGCGGCTATC CGACCGTACC CATCTCCGCG ATACCGGAAC GCGACGCGAG CGGCCGCACC
GTCTGGGTGA CGCGAGCGCG GCCGAAAATC GACCGTATCG CCTGTCCCTG GCTGATCCGC
CGCTTCGTCG ATCCGCTGGC CGTCTTCCTT TACGTTGCCC CGTCCGAGGT CGAGGCGGTT
GCCGAGCGCT TCGCAGCGAC GCCCTTCGAC ATGGATGCGC CGATCCGCTG GAGCCACCGG
GGCGAGCTTT GCACCTTCGA CATAATGGTC GAGGAGTTCG GCCTATCGAT CGAACCGCTG
CTGCGACTCG CGACCATCGT TCGCGGCGCG GATACGTCCC GCCTCGACCT TGCGCCACAA
GCGTCGGGGT TACTGGCGGC ATCCCTCGGC CTGTCACGCA TGTATGCCGA CGACCTCGAG
CAGCTCGAGG CGGGCATGGC GCTCTACGAT GCCTTTTATC GCTGGTGCCG GGATGCTACC
GACGAAACGC ACAACTGGCC GTCTCCGAAG AAGGATTCGT GA
 
Protein sequence
MSSHLEIAPE KLARLIGTPK CPALIDVRVG EDFDEDPRLV PGSIRRDYRK VQEWATELGG 
TSAVVVCHRG KKLSYGVAAW LRNYGIAADV LEGGVAAWTE GGYPTVPISA IPERDASGRT
VWVTRARPKI DRIACPWLIR RFVDPLAVFL YVAPSEVEAV AERFAATPFD MDAPIRWSHR
GELCTFDIMV EEFGLSIEPL LRLATIVRGA DTSRLDLAPQ ASGLLAASLG LSRMYADDLE
QLEAGMALYD AFYRWCRDAT DETHNWPSPK KDS